| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4572 |
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| Symbol | |
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| ID | 5672919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5454842 |
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| End bp | 5455981 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641243435 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001508851 |
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| Protein GI | 158316343 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.417277 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG CGCTGGGCGA CGTCACGGTC GTGTGCCTCA GCGCGCTCGG GCCGGTCCCG
TTCGCGACCA TGCTGCTCGC CGACCTGGGC GCCCGGGTGA TCCGGATCGA CCGGGCCGAC
CGGCCCGGTG GCGTCACCGG CCTGCGGCTC GAGGACGATC CCCGTACCCG GGGGCAGCGC
GGCATCGGGG TCGACGTCCG GCATCCGTCG GGCCGGTCCG TGGTGCTGCG GCTGGTCGAG
ACGGCGGACG TGTTCCTGGA GGGAATGCGC CCCGGTGTCG CCGAGCGGCT CGGGCTCGGC
CCGGCCGAGC TGCTGGCCGT CAACCCCCGC CTGGTGTACG GGCGGGCGAC GGGGTGGGGG
CAGTCGGGCC CGCGCGCTCA ACAGGCCGGG CACGACATCA ATTACGCCGG GCTCGCCGGC
GGCCTGTACC CGACCGGACC GGCCGAGCTG CCGCCGCTGC CGCCGCTCAA TCTGCTGGCC
GACTTCGCCG GCGGCGGTTC CTACCTCGCC CTCGGCGTGC TCGCGGCCCT GCACCACCGC
ACGGGGACCG GACGCGGCCA GGTGGTCGAC GCGGCCATGG TCGACGGCGT CGCCAACCTC
ACGGCGATGA TGCACGGGAT GCTCGCGGCC GGCCTGTGGA GCGATCGCCG CGGCGACAAC
CTGCTCGACG GCGGCGCCCC GTTCTACCGC ACCTACCGCA CCGCCGACGA CGGCTTCGTC
GCCGTGGGCG CGCTGGAGCC GCAGTTCTAC CGGCTGCTGC TGGAGAACCT CGGGCTCGAC
CCCGCGCGGT GGCCGCAGCA CGACCGGTCG ACCTGGCCCG AGCAGGAGCG CGTCCTGGGG
GATCTGTTCG CCGCGCGCAC CCGGGACGAG TGGACGAAGC TGTTCGACGG CGTCGACGCC
TGTGTGACGC CCGTGCTGAG CCTGGCGGAG GCGGCGGCCT CGGCCGAGCT GCGCGAGCGC
GCGACCTTCG TCGAGTGGGA CGGCGTCGCG CAGCCGGCGC CGGCACCCCG GCTGTCGGCG
TCCCCGGCCG TCGAACGTCC CCGGTCGGGC TGGTGCAGCC ATTCGGCCGA GATTCTGACC
GAGCTCGGGC TGACCGAGAC GGAGCGGGCG GCGCTGCGCG ACGCGGGTGT GATCGCTTAG
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| Protein sequence | MTQALGDVTV VCLSALGPVP FATMLLADLG ARVIRIDRAD RPGGVTGLRL EDDPRTRGQR
GIGVDVRHPS GRSVVLRLVE TADVFLEGMR PGVAERLGLG PAELLAVNPR LVYGRATGWG
QSGPRAQQAG HDINYAGLAG GLYPTGPAEL PPLPPLNLLA DFAGGGSYLA LGVLAALHHR
TGTGRGQVVD AAMVDGVANL TAMMHGMLAA GLWSDRRGDN LLDGGAPFYR TYRTADDGFV
AVGALEPQFY RLLLENLGLD PARWPQHDRS TWPEQERVLG DLFAARTRDE WTKLFDGVDA
CVTPVLSLAE AAASAELRER ATFVEWDGVA QPAPAPRLSA SPAVERPRSG WCSHSAEILT
ELGLTETERA ALRDAGVIA
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