| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4571 |
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| Symbol | |
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| ID | 5672918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5453973 |
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| End bp | 5454758 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243434 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508850 |
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| Protein GI | 158316342 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.458297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.40327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACG AGACGCTGGT CAACGAGACG CCGGCCAAGG AGCACGCTGG CAAGGTCGCG
CTGATAACAG GGGGCGGCCG CGGCTTCGGC AAGGCGTTCG GCGCCGCGCT GACCGAGCGC
GGGGCGCACG TCGTGCTGGC CGACATCGAC GGTGACGTCG CCTCGGCCGC CGCGGCCGAG
CTCACCGCGC TCGGCGGCAG CGCGACCGGG GTCACCTGCG ACGTGACGGA CGAGGCCCGC
GTCGGTGAGG TGGTGGCCGA CATCGTCCGC GCGCACGGCG GGCTCGACAT TCTGGTCAAC
AACGCGGGGC TGCACTCGGC CGCCTTCAAC AAGCCGACCG CCGAGCTCGG CGCCGGCCAG
ATCCGCCGGC TGTTCGAGGT CAACGTGATG GGTGTCGTCA TATGCACGTT GGCCGCGAAG
GACGCTATGA GCGGGCGGGC GGGCGCCGCC GTCGTCAACA TCTCCTCCTC GGCGGCCTAC
GCCAACCGGA CCGCCTACGG CGTCTCCAAG CTGGCGGTGC GCGGCTTCAC CGCGCAGTTC
GCCCGCGAGC TGGCCGCGGT CGGCGTCCGG GTCAACGCGA TCGCCCCCGG GCTGATCCTC
ACCGACACCG TGCGGGCCGA GCTGCCCGCG ACCGAGGTCG CGCGCGTCCT CGCGCAGCAG
GTCCTGGCGC GCGAGGGCGA GGAGCGGGAC GTGGTGAACG CGCTGCTCTA CCTGGTCTCG
GACGCAGCCG CCTTCATCAC CGGGGAGACG CTGCGGGTCA CCGGTGGGTT CGCGCTCTCG
GTCTAG
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| Protein sequence | MPDETLVNET PAKEHAGKVA LITGGGRGFG KAFGAALTER GAHVVLADID GDVASAAAAE
LTALGGSATG VTCDVTDEAR VGEVVADIVR AHGGLDILVN NAGLHSAAFN KPTAELGAGQ
IRRLFEVNVM GVVICTLAAK DAMSGRAGAA VVNISSSAAY ANRTAYGVSK LAVRGFTAQF
ARELAAVGVR VNAIAPGLIL TDTVRAELPA TEVARVLAQQ VLAREGEERD VVNALLYLVS
DAAAFITGET LRVTGGFALS V
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