| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4564 |
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| Symbol | |
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| ID | 5672911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5445130 |
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| End bp | 5448099 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243427 |
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| Product | ABC transporter related |
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| Protein accession | YP_001508843 |
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| Protein GI | 158316335 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAGCA CCGACCTCAT CTTTCTGATC CTCGGCCTCG GTAATGGCGC CGTCTACGCG
GCGCTCGGGC TCGGCCTGGT CCTCACCTAC CGCAGCTCGG GTGTGGTCAA TTTCGCCACC
GGTGCGGTTG CCCTCTACAC CGCCTACACC TATGCCTTCC TTCGGCAGGG GAAACTGCTC
AACCCGATCC CCGGCTTAAC CGGGACCGTC GATCTCGGGA TCGACGGGAT GGGCTTCCCG
GCGGCGTTCG CACTCTCGCT GGTGGTCGCC GCGGCGCTGG GATCACTGCT GTACGCGGCT
GTCTTCCGTC CGATGCGGGC GGCACCCACC GCCGCGAAGG CCGTCGCGTC GATCGGCGTG
ATGATCGTCA TGCAGGCGCT GCTCGCGGTC CAGGTGGGCA CGACCGCGGT CTCGGTGGCG
GCCATCCTGC CGACGCGCAT CTACACCGTC GCCGGGCAGC GGGTTCCCGG CGACCGGCTC
TGGTTCGCCG GCATCATCAT CGTGATGGCG GTCGCCCTGA CACTGTGGTT CCGGCTCACC
CGGTTCGGCC TGGCCACCCG CGCGGCGGCC GAGTCCGAGA AGGGCGCCCT GGTCACTGGG
CTGTCGCCGC AGCGCATCGC GCTGGTCAAC TGGGCCCTGA GCACCATGAT CGCCGGTGTC
GGCGGCATCC TCATCGCGCC CATCGTTCCG CTCACCCCGG TGTCCTACAC CCTGTTCATC
GTCCCGGCGC TGGCGACGGC GCTCGTCGGG AACTTCACCA GGATCGGTAC GGCGGTCTCG
GCCGGGCTCG TCATCGGCAT GCTGCAGTCG GAGGCCACGA ACCTGCAGAC CAGGAGCTGG
CTGCCGTCGT CCGGCCTCGC CGAGCTCGTC CCGCTCGCCG TCATCCTGAT CTTCCTGGTC
TTCCGGGGGC AGACCCTGCC CTCGCGCGGC TCGATCGTGC AGCAGACCCT CGGCCGGGCG
CCGCGACCGA AGTCGATGGT GCTGCCCGGT GTGGTCATCG CCGCCGCCGG GTTCGCCGCG
CTGGCGGCGA CGCACGGTTC CCACCGGGCA GCGATCATCA CCACGCTCGT CCTGGCGATC
ATCGCGTTGT CCCAGGTGGT CGTCACCGGC TTCAGCGGCC AGATCTCCCT GGCGCAGCTG
ACCCTGGCCG GCGTCGGCGC GTTCGCGCTG ACCCGGATCC AGCACCAGCT GCACGTGCCG
TTCCCGATCG CGCCGCTGCT CGCCGCCGTC TTCGCGACGA TCGTGGGGGT GGTGGTCGGC
CTGCCGGCGC TGCGGATCCG CGGCCTGCCG GTGGCGGTCA CCACGCTCGC GCTGGCGGTG
GTGCTCGAGA AGCTGTGGTT CACCAACAAG GACCTCAACG GCGGGTTCAA CGGCTCGCCG
ATCGACGACG CGAGCATCTT CGGCGTCAAT CTCGGGATCG GCGCCGGCGC CGGCTACCCA
CGCCTCACGT TCGGCCTGTT CTGCCTGGTC GTCCTGCTGC TGGTGGCCGG TGGCGTGGTG
CTGTTGCGCC GCAGCCGGCT GGGGGCGGCG ATGCTGGCGG TACGCGCCAA CGAACGATCG
GCCGCCGCCT CGGGCATCTC CGTGTCGCAG GTGAAGCTCG TCGCCTTCGC CATCGGCGGG
TTCCTCGCCG GGCTGGGCGG CGCCATGCTG GCCTACCAGC AGACCGTGGC GGACTCCAGC
TCGTACACCG CGATGGGCTG CGTCGCGCTG TTCGCCACCG CGTACCTGGC CGGCGTCACG
TCGGTGTCCG GCGGCATCAA CGCCGGGCTC ATCGGCGCGG GCGGCATCAT CTTCACCCTG
GTCGACAAGG GCCTGCCGCT GGGCGTCTAC GTCCTGCTGG TCGGGCTGCC CGTCCTCGCG
ATCGTCGCCG AGATCCGACC GAAGCTGATC CCGGCGCTGT CCGGTGTGGT CGGGGTGCTG
ACCCTGGCGG CCTTCCTCCT CCACCGTGAC ACGGTGGCCC TGGGCGACTA CTACACGACC
GTCAGCGGCG TCCTGTTGGT GCTCACCGTC ATCCTCAACC CGGAGGGCAT CGTCGGGCCG
GTGCACGAAC ATCTGGGCGC GCTGCGCACC AGGCTCGGAC GCCGATCGCC GGCCTCCCTC
GCCCGGCCGG CCGGAAACGC ACCGGCCAGG GACGCGGTCG CGGCAACCAC AGCCTCCGAG
CTGGCGGTAC CCCACGACAC CCACGAGGTC ACGGCGGGCC CGCTGCTGCG GGTCAGCGGC
GTCGGCGTGC GCTACGGCGC CGTCGTCGCG AACCAGGACG TGAGCTTCGA CGTCGACCGC
GGCGAGATCG TCGGCCTCAT CGGCCCGAAC GGCGCCGGCA AGACGACCCT GATCGACGCG
ATAAGCGGCT ATGCCGACGC GACCGGGTCG ATCGAGTTCC TCGGCCGCAG GCTCGACGGG
CTCAAACCCC ATCAGCGGAG TCGGCGCGGC CTCGGCCGGA CCTTCCAGGG CATCGAGCTG
TACGACGATC TCAGCGTCCG GGAGAACGTC CAGACGGGCA CGATGGCGGT CCGCTCGTCG
GGCGACCGCG CCACGCCGTC GCCCGTGGAC ATCGACCGGT TGTTCACCAT CCTGCATCTC
GAGGCGGTGT CCGAAGCCCC GGTGCGGGAG CTGTCCGTCG GGCAGCGTCA GCTGGTCTCC
GTCGCCCGCG CGCTGGCCGG GCGTCCGGCG ATCGTCCTGC TGGACGAGCC GGCCGCCGGG
CTGGACACGA CCGAGAGCCG CTGGCTGGGC GAGCGGCTGC GGGCCATCCG CGACGCCGGC
ATCACCATCG TCATGGTCGA CCACGACATG GGCCTCGTCC TGGACGTGTG CGACCGGATC
GTGGTGCTCA ACCTCGGGGA GGTAATCGTG GTCGGCACAC CGGCAGAGAT CCAGCGCAAC
CCGGAGGTCA CCCGCGCCTA CCTGGGCACG ACGCACGGGC ACGCGGAGCA CGGGCACGCA
GAGCGCGTGC ATGCGGAGGA GGTGCGATGA
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| Protein sequence | MGSTDLIFLI LGLGNGAVYA ALGLGLVLTY RSSGVVNFAT GAVALYTAYT YAFLRQGKLL
NPIPGLTGTV DLGIDGMGFP AAFALSLVVA AALGSLLYAA VFRPMRAAPT AAKAVASIGV
MIVMQALLAV QVGTTAVSVA AILPTRIYTV AGQRVPGDRL WFAGIIIVMA VALTLWFRLT
RFGLATRAAA ESEKGALVTG LSPQRIALVN WALSTMIAGV GGILIAPIVP LTPVSYTLFI
VPALATALVG NFTRIGTAVS AGLVIGMLQS EATNLQTRSW LPSSGLAELV PLAVILIFLV
FRGQTLPSRG SIVQQTLGRA PRPKSMVLPG VVIAAAGFAA LAATHGSHRA AIITTLVLAI
IALSQVVVTG FSGQISLAQL TLAGVGAFAL TRIQHQLHVP FPIAPLLAAV FATIVGVVVG
LPALRIRGLP VAVTTLALAV VLEKLWFTNK DLNGGFNGSP IDDASIFGVN LGIGAGAGYP
RLTFGLFCLV VLLLVAGGVV LLRRSRLGAA MLAVRANERS AAASGISVSQ VKLVAFAIGG
FLAGLGGAML AYQQTVADSS SYTAMGCVAL FATAYLAGVT SVSGGINAGL IGAGGIIFTL
VDKGLPLGVY VLLVGLPVLA IVAEIRPKLI PALSGVVGVL TLAAFLLHRD TVALGDYYTT
VSGVLLVLTV ILNPEGIVGP VHEHLGALRT RLGRRSPASL ARPAGNAPAR DAVAATTASE
LAVPHDTHEV TAGPLLRVSG VGVRYGAVVA NQDVSFDVDR GEIVGLIGPN GAGKTTLIDA
ISGYADATGS IEFLGRRLDG LKPHQRSRRG LGRTFQGIEL YDDLSVRENV QTGTMAVRSS
GDRATPSPVD IDRLFTILHL EAVSEAPVRE LSVGQRQLVS VARALAGRPA IVLLDEPAAG
LDTTESRWLG ERLRAIRDAG ITIVMVDHDM GLVLDVCDRI VVLNLGEVIV VGTPAEIQRN
PEVTRAYLGT THGHAEHGHA ERVHAEEVR
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