| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4556 |
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| Symbol | |
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| ID | 5672903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5434990 |
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| End bp | 5435757 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641243419 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508835 |
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| Protein GI | 158316327 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA AGTCCGTCCC GGCATTCGTC ACCGGCGGCT CGTCCGGCCT GGGCCTGGCG
ACCGCGCGAC GGCTGGCCGC CGCGGGAGCG GAGGTCGCGA TCGCCGATCT CAACCCGCCG
GGAGAGGACG TCCTCGCCGC GCTCGGCGAC CGGGCCGTCT ACATCGAGAC CGACGTCGCC
GACGAGGCCT CGGTGAACCA CGCCCTGGAC GTGGCCCAGC AGGCGCACGG CACGCTGCGC
GCGGTCGTGC ACTGCGCCGG TCGCGGCGGA GACCGCGTCC GCATCCTCGA CCGGGACGAC
CGGCCGGGTG CCCTGGACAC CTTCGCCGAA GTCGTGCGGG TGAACCTGAT CGGCACCTAC
AACGTCCTGC GCCTGGCGGC CGCGCGGATC GCCGCGGGCG AGATCGTCGA CGGCGAGCGT
GGCGCCGTCG TGCTGACGGC CTCGGTCGCC GCGTTCGACG GCCAGATCGG GCAGACGTCC
TACACCGCGG CGAAGGCTGG TGTGCACGGG ATCACGCTCG TGGCCGCGCG CGACCTGGCC
AGCCGGCAGA TCCGCGTCAA CACGATCGCG CCCGGCGTCT TCGACACCCC GATGCTGGCC
CGGCTGCGCG CGGACATCCG CGAGGCGCTC GAGCGCACCG TGCCCCATCC CAGTCGGCTC
GGCTCACCCG AGGACTACGC CCACATGGCG ATCAGCCTGC TCGAGAACCC GTATGTGAAC
GGCGAGACCG TCCGGCTGGA CGGGGCCATC CGGATGGCCG CTCGCTGA
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| Protein sequence | MNLKSVPAFV TGGSSGLGLA TARRLAAAGA EVAIADLNPP GEDVLAALGD RAVYIETDVA
DEASVNHALD VAQQAHGTLR AVVHCAGRGG DRVRILDRDD RPGALDTFAE VVRVNLIGTY
NVLRLAAARI AAGEIVDGER GAVVLTASVA AFDGQIGQTS YTAAKAGVHG ITLVAARDLA
SRQIRVNTIA PGVFDTPMLA RLRADIREAL ERTVPHPSRL GSPEDYAHMA ISLLENPYVN
GETVRLDGAI RMAAR
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