| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4551 |
|---|
| Symbol | |
|---|
| ID | 5672898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5430485 |
|---|
| End bp | 5431138 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641243414 |
|---|
| Product | regulatory protein TetR |
|---|
| Protein accession | YP_001508830 |
|---|
| Protein GI | 158316322 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGTCGGCA AGGCGACCCG CGCCTACCAC TCGCCGCTGC GGGCCGCCCA GGCCCAGGCC
ACCCGCGCGG CGATCCTGGA CGCCGCGGTC GTGGTCTTCG GTGAGCACGG CTACGCCGGG
ACCACGATGC GCGCCATCGC GGCTGAGGCC GGCGTCGCGG TCGAGTCGGT CTACGCACTG
GCGGGCAAGG CACGCCTGCT GGAGCTGGCG TTGGAACGCG CGGTGACCGG GGGAGAGGAC
GCCGACCGCG CGGACCTTCC CCTCGCCGAG CAGACCGGCT TCCGGGCAGC GCTGGACGCG
CCCGACCAGC GTGAACAACT ACGCCTGTTC GGACTGATGA GCATCGGCCC AGCCCGCCGT
GTGGCGGCTA TCAGCCGGGC GTTCATGCAG GCCAGCATGG TCGACGAAGC TCTCGGGAAG
CGTTGGCGGG AGCAGGAGGA ACGGCGCTGC GCCGACATGC GGACGTTCGT CGCCGCGGTG
GCGGCCCGGG GGCCGCTGCG GCCCGGGCTG ACCGTCGACA CCGCCGCCCG CGACGTCTGG
TCGACTCTCA ACTGGTACAC CACCTGGCTC CTGCTGGAGG AACGCCGCCT CGATGACCGT
GCCTTCGCCC ACTGGGTCGA GCACACCCTC GCGGCGCTGC TCCTGCCCGG CTGA
|
|---|
| Protein sequence | MVGKATRAYH SPLRAAQAQA TRAAILDAAV VVFGEHGYAG TTMRAIAAEA GVAVESVYAL
AGKARLLELA LERAVTGGED ADRADLPLAE QTGFRAALDA PDQREQLRLF GLMSIGPARR
VAAISRAFMQ ASMVDEALGK RWREQEERRC ADMRTFVAAV AARGPLRPGL TVDTAARDVW
STLNWYTTWL LLEERRLDDR AFAHWVEHTL AALLLPG
|
|---|
| |