| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4544 |
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| Symbol | |
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| ID | 5672893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5421088 |
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| End bp | 5421864 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641243409 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508825 |
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| Protein GI | 158316317 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGAGGC AGACGGATAT CAGAATGAGC ATCTCAGGCA TCCACGCGCT CATGGCCGCG
CCCTACGGTT CATCCATGAA CCTCTCTGGA AGCATCGCCC TCGTCACCGG CGCGAACCGC
GGCATCGGCC GCCACTTCGT CGAACAGCTC CACGACCGGG GGGCGTCGAA GGTCTACGCC
ACGGCGCGCA ACCCCCGGTC GGCCGACCTC CCCGGTGTCG AGACGCTGCC GCTCGACATC
ACCGACCCGG ACTCGGTCGC CGCGGCCGCC GCCGCGGCAT CCGACGTCAC GCTGCTGGTC
AACAACGCCG GCGTGTCCAC CGCGCAGAAT CTCGTCACCG GCGATCTGAC GAAGATCCGT
CTTGAGATGG ACACCCACTT CTACGGAACC CTCGCGATGG TGCGCGCGTT CGCCCCGGTG
CTCGCCGGCA ACGGCGGCGG CGCGGTCCTC AACGTCCTTT CCAGGCTGTC CTGGCTGTCC
TATCTCGGGG CCAACGCCTA CAGCGCGGCC AAGGCCGCGG AGTGGAGCCT GACCAACGGA
ATCCGCCTGG AGCTGCGCGA GCAGGGCACC CTCGTCACGG GTCTGGTCCT GAGCAGCACA
GACACCGACA TGATGGCCGG CTGGGACATC CCGAAGAACG ATCCGGCCGA TGTCGTACGT
GCGGCGTTGG ACGGCCTGGA GGCCGGGCGG TTCGAGATCC TCGCCGACCG GGACAGTGCC
GAGGCCAAGG CGGCGCTCAG CACCGACCCG GGTGTCCTGT ACGCCCAGAC CGGATGA
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| Protein sequence | MVRQTDIRMS ISGIHALMAA PYGSSMNLSG SIALVTGANR GIGRHFVEQL HDRGASKVYA
TARNPRSADL PGVETLPLDI TDPDSVAAAA AAASDVTLLV NNAGVSTAQN LVTGDLTKIR
LEMDTHFYGT LAMVRAFAPV LAGNGGGAVL NVLSRLSWLS YLGANAYSAA KAAEWSLTNG
IRLELREQGT LVTGLVLSST DTDMMAGWDI PKNDPADVVR AALDGLEAGR FEILADRDSA
EAKAALSTDP GVLYAQTG
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