Gene Franean1_4540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4540 
Symbol 
ID5672889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5416764 
End bp5417762 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content68% 
IMG OID641243405 
Productaldo/keto reductase 
Protein accessionYP_001508821 
Protein GI158316313 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACG CCAACCTCGG AACCTCCGGG CTGAAGGTCA GCCGTATCGC GCTCGGCTGC 
ATGAGTTTCG GCAGGCCCGG CACGGGTCGC GACTGGGCGC TGGACGCCGA CGCCGCCAAG
CCGATCTTTC AGCAGGCCGT CGACCTCGGC ATCACGCTTT GGGATACCGC CAACACCTAC
AGTCGGGGGA CGTCCGAGGA GATCACCGGT GAAGCTGTGA AGCGGTACAC GAGCCGCGAC
CAGGTCGTGA TCGCGACGAA GCTGTTCGCG CCGATGGGCT CCGGCCCCGG CGGCCGGGGC
CTTTCGCGCC GCGCCGTCTT CGAGCAGCTC GACGCGTCGC TGCGACGGCT CGGCACCGAT
TGGATCGACC TTTACCAGAT CCACCGATTC GACCCGCACA CCCCCGTCGA GGAGACGATG
GAGGCCCTCC ACGACGCCGT GAAATCGGGC AAGGTGCGCT ACCTGGGCGC TTCCTCGATG
TGGGCCTGGC AGTTCTCCAA GCTGCAGTAC ACCGCGCAGC TGCACGGCTG GACGAAGTTC
ATCTCCATGC AGGACCAGTA CAACCTCGTC GCCCGCGAGG AAGAGCGCGA GATGTTCCCG
CTGCTGTCGG ACCAGGGCGT CGGCAGCCTG CCATGGTCGC CGCTCGCTGC CGGCCTGGTG
ACCCGGCCGT GGGGTGACGC GAGCACGACC CGCGGCGCGC TGAACCCGAC GGCCGACGCG
TCCGGCACCC CGCTGTTCCT CGACAGCGAC CGCGGGACGG TCGACGCGGT CCAGCGCATC
GCCGAGGCAC GGGGGACCTC GATGGCGCAG GTGGCGATGG CGTGGGTGCT GCGCAACCCT
GTCGTGACCG CCCCGATCGT CGGAGCGACC AAGTCGCACC ATCTCGCCGA CGCCGTGGCC
GCGCTCGACA TCAATCTCGG TAAGGACGAG GTCACCGCTC TGGAGGAGAG CTACACGCCG
CGCAGGCCGA CCTACTACGG CTCCGAGTCG GGGTACTGA
 
Protein sequence
MEYANLGTSG LKVSRIALGC MSFGRPGTGR DWALDADAAK PIFQQAVDLG ITLWDTANTY 
SRGTSEEITG EAVKRYTSRD QVVIATKLFA PMGSGPGGRG LSRRAVFEQL DASLRRLGTD
WIDLYQIHRF DPHTPVEETM EALHDAVKSG KVRYLGASSM WAWQFSKLQY TAQLHGWTKF
ISMQDQYNLV AREEEREMFP LLSDQGVGSL PWSPLAAGLV TRPWGDASTT RGALNPTADA
SGTPLFLDSD RGTVDAVQRI AEARGTSMAQ VAMAWVLRNP VVTAPIVGAT KSHHLADAVA
ALDINLGKDE VTALEESYTP RRPTYYGSES GY