| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4536 |
|---|
| Symbol | |
|---|
| ID | 5672885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5412152 |
|---|
| End bp | 5412904 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641243401 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_001508817 |
|---|
| Protein GI | 158316309 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGG GCCTGGTCAC TGTCGATCTT CAGGGAAGCG TGGCGGTGGT GGAGATGCAC
CGACCGCCGA ACAACTTCTT CGACGAGGCC AGCCTCCGAG AGCTGGCTCA GGCCCTGCTG
CGCGTCGACG CCATGCCCGA GGCGCGCTGT GTGGTGCTGT GCGCGGAGGG GCGGCACTTC
TGCGCGGGCG CTGATCTGCG CGACGTCGAC GCGGACGGAC TGCGTCGGGT CTACCGCGAG
GCGTTCGCCA TCTTCACCGC ACGCAAGCCC GTTATCGCCG CCGTACAGGG CGCCGCGATC
GGTGGTGGTC TCGGGCTGGC CCTGGCCGCC GACTTCCGGG TTGCCGCCGA AAACGCGCGG
TTCAGCGCGA ACTTCGCCCG GCTGGGCTTC CACCAGGGCT TCGGTCTCTC GGTCACCCTG
CCGGCGGCTG TCGGGTCACA GAAGGCGCGC GATCTGCTGT ACACAGGTCG CTCGGTTAAC
GGTGCTGAGG CGCTCGCGAT GGGGCTGTGT GACCGGGTCA CGGCGGCCGA CCCGCGGGAG
GAGGCGCTGG CCTGGGCCCA TGACGTCGCC CTGTCGGCGC CGCTGTCCCT GCTGTCGATC
AGGTCGACCC TGCGGCGTGA GCTCGTGGCG CGGGTGTCGG CGGCTCTCGA CCAGGAGGCT
GCCGCGCAGG CGGTCCTGCT CGGGACCGAC GACTTCCGGG AGGGAGTCCA GGCTTCAATC
GGCAAGCGGG CACCATCCTT CACCGGAGCC TGA
|
|---|
| Protein sequence | MSLGLVTVDL QGSVAVVEMH RPPNNFFDEA SLRELAQALL RVDAMPEARC VVLCAEGRHF
CAGADLRDVD ADGLRRVYRE AFAIFTARKP VIAAVQGAAI GGGLGLALAA DFRVAAENAR
FSANFARLGF HQGFGLSVTL PAAVGSQKAR DLLYTGRSVN GAEALAMGLC DRVTAADPRE
EALAWAHDVA LSAPLSLLSI RSTLRRELVA RVSAALDQEA AAQAVLLGTD DFREGVQASI
GKRAPSFTGA
|
|---|
| |