Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4519 |
Symbol | |
ID | 5672868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5392315 |
End bp | 5392692 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641243384 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001508800 |
Protein GI | 158316292 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.591188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGACA AGGAAAACGG CCGGCGCATC CTGAGCGAGC TCATGGGAGC CGACTATGTC GCGGCGAAGG ACAAGAAGCG CAACTCCTTC AACGAGGTGA TCCAGGATTA CTCCGAGGAG GTCTGCTTCG GCCGGATCTG GTCGCGCGAC GGCATCAACC GCAAGCAGCG CAGCATCATC AACGTCGCGA TGCTCACCGC GTTGAACAGG CCCGCGCAGC TCGCCCACCA CATCGAGGGC GCGATGACCA ACGGCGCCAC GGTCGCCGAG ATCCAGGAGA TCCTGCTGCA GACGGCGGTC TACTGCGGGC TGCCCGCGGC GGGCGAGGCC TTCCGGATCG CGGAGGAGGT CCTCCGCGAA GGCGGACACC TCGACTGA
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Protein sequence | MTDKENGRRI LSELMGADYV AAKDKKRNSF NEVIQDYSEE VCFGRIWSRD GINRKQRSII NVAMLTALNR PAQLAHHIEG AMTNGATVAE IQEILLQTAV YCGLPAAGEA FRIAEEVLRE GGHLD
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