Gene Franean1_4519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4519 
Symbol 
ID5672868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5392315 
End bp5392692 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content66% 
IMG OID641243384 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_001508800 
Protein GI158316292 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.591188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACA AGGAAAACGG CCGGCGCATC CTGAGCGAGC TCATGGGAGC CGACTATGTC 
GCGGCGAAGG ACAAGAAGCG CAACTCCTTC AACGAGGTGA TCCAGGATTA CTCCGAGGAG
GTCTGCTTCG GCCGGATCTG GTCGCGCGAC GGCATCAACC GCAAGCAGCG CAGCATCATC
AACGTCGCGA TGCTCACCGC GTTGAACAGG CCCGCGCAGC TCGCCCACCA CATCGAGGGC
GCGATGACCA ACGGCGCCAC GGTCGCCGAG ATCCAGGAGA TCCTGCTGCA GACGGCGGTC
TACTGCGGGC TGCCCGCGGC GGGCGAGGCC TTCCGGATCG CGGAGGAGGT CCTCCGCGAA
GGCGGACACC TCGACTGA
 
Protein sequence
MTDKENGRRI LSELMGADYV AAKDKKRNSF NEVIQDYSEE VCFGRIWSRD GINRKQRSII 
NVAMLTALNR PAQLAHHIEG AMTNGATVAE IQEILLQTAV YCGLPAAGEA FRIAEEVLRE
GGHLD