Gene Franean1_4509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4509 
Symbol 
ID5672858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5381410 
End bp5381580 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content60% 
IMG OID641243374 
Productinsertion element is466s transposase 
Protein accessionYP_001508790 
Protein GI158316282 
COG category[L] Replication, recombination and repair 
COG ID[COG3464] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.282585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAA TCACGAAGGA CCTCGATCTC AACGAGGGAG CAGCTGCGCT GACCTGCGCC 
CACCATAACG GCGGCACCGA AGGCGTCAAC ACCAAGACCA ATCTGATCAA AAGGCAGATG
TACGGACGAG CGGGCTTCAC GCTCCTCCGA CACCGGATCC TGCTCGGTTG A
 
Protein sequence
MPAITKDLDL NEGAAALTCA HHNGGTEGVN TKTNLIKRQM YGRAGFTLLR HRILLG