Gene Franean1_4501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4501 
Symbol 
ID5672850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5370368 
End bp5370877 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID641243366 
Productdehydratase 
Protein accessionYP_001508782 
Protein GI158316274 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTG GCCGGTACTA CGAGGAGTTC GAGGTCGGTG CGGTCTACAG GCACTGGCCT 
GGCAAGACGG TCACCGAGTA CGACGACCAC GTGTTCTGCC TGCTCACGAT GAACCACCAC
CCGCTGCACC TGGACGCCAA CTACGCCGAG CGGACCACCC AGTTCAAGCG GAACGTGGTC
GTCGGGAACT ACGTGTACTC GCTGCTGCTC GGGATGTCCG TCGCTGACGT TTCCGGCAAG
GCGATCGCCA ACCTGGAGGT CGAGTCGCTG CGGCATGTGG CGCCGGTCTT TCACGGGGAC
ACGATCTACG GTGAGTCGAC GGTGCTGGAC AAGGTGGAGT CGAAGAGCAA GGACGACCGC
GGCATCGTGA CGGTCGAGAC CCGCGGCCTC AACCAGGACG GCACCCTGGT CTGCATCTAC
CGGCGCAAGG TGATGGTCCC CAAGCGGTCC TACGGCGAGG CTCGCGGCGG AGAGCAGCCC
GGCCGGCCCT CGCACCGGGA CGCGGGCTGA
 
Protein sequence
MQFGRYYEEF EVGAVYRHWP GKTVTEYDDH VFCLLTMNHH PLHLDANYAE RTTQFKRNVV 
VGNYVYSLLL GMSVADVSGK AIANLEVESL RHVAPVFHGD TIYGESTVLD KVESKSKDDR
GIVTVETRGL NQDGTLVCIY RRKVMVPKRS YGEARGGEQP GRPSHRDAG