Gene Franean1_4493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4493 
Symbol 
ID5672843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5360378 
End bp5360824 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content70% 
IMG OID641243360 
Producthypothetical protein 
Protein accessionYP_001508776 
Protein GI158316268 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGCG GTGCGGCGGG TGGCGCGGCG GTGCGCAAGC CCGTTCCTCT CCCCGAACCC 
GCCAGCGAGG GGTTCTGGGC CGCGGCCCGG GACGGCCGGC TCGTCGCGCA GCGCTGCACG
ACCTGCCGCA ACTATCTCTA TCCTCCGGAC ATCGTCTGCC CCCGATGCCT CACGGAGACG
CTGGAGTACG TGCACCTGAG CGGCGCGGCC ACCCTCTACA GCTTCGTGGT GATGAACCGG
GCATTCTACG CCGGGTTCGC CGAGGATCTG CCGTACGTGG TGGCCTTCGT CGAGCTCGAC
GAGCAGCCGG GGCTGCGGAT GGTGTCCAAC GTCGTGGGCT CGGACCCGGC GGCGTTGCGG
ATCGGCGATC GGCTTCAGGT CGAGTTCGAC GACCGCGGAA CGCAGTCGGT ACCGGTGTTC
CGGGTGCGCG AAGGGGGATC GGCGTGA
 
Protein sequence
MTGGAAGGAA VRKPVPLPEP ASEGFWAAAR DGRLVAQRCT TCRNYLYPPD IVCPRCLTET 
LEYVHLSGAA TLYSFVVMNR AFYAGFAEDL PYVVAFVELD EQPGLRMVSN VVGSDPAALR
IGDRLQVEFD DRGTQSVPVF RVREGGSA