| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4489 |
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| Symbol | |
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| ID | 5672839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5356385 |
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| End bp | 5357224 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641243356 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508772 |
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| Protein GI | 158316264 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGGC GAGTCGCCGG GAAGGTCGCG CTGATCACCG GGGCGGCGCG CGGGCAGGGC
CGCAGCCACG CGGTTCGGCT CGCGCAGGAG GGGGCCGACA TCATCGCCGT CGACCTCTGC
GCCGACGTGC CGGGCGTGCC GTACCCGGGG GGCACCCGCG AGGATCTGGC CGAGACGGTA
CGGCAGGTGG AGGCCCTCGA TCGGCGGGCC GTGGCGACGG TCGCCGACGT GCGTGACCAC
GAGCAGCTCG CGGCGGCTGT GGTGGGGGGT GTCGCCGAGT TCGGGCGGCT CGACGTGGTC
AGCGCGAACG CGGGCATCGC CATGCCGCCC TTCCCCACCC ACGAGATGCC CGAGGAGGTG
TGGCAGGGCA TGCTTGCGGT CAACCTGACC GGCGTCTGGC ACACCTGCAA GGCCGCCATA
CCGCACCTGA TCGCGGGTGG CCGCGGCGGG TCGATCATCC TTACGAGTTC CGCGGCTGGT
CTCAGGGGTT ACGAGAACAT CGCCAACTAC GTCGCGGCCA AGCACGGCGT GGTCGGTCTG
ATGCGGACGC TGGCCAACGA GCTCGCCCGG CACTCGATCC GGGTGAATTC GGTGCATCCC
ACCACTGTCT CGACCGAGAT GATCCAGAAC GAGTCGACCT ACCGCCAGTT CCGGCCGGAC
CTGACCGACA CGCCGACCGA GGACGACGTG CGCGACGCGT TCACGTCGCT CAATCTGATA
CCGGTGCCCT GGATTGAGTC GATTGACGTG TCGAACGCGC TGCTGTTTCT CGCGTCCGAC
GAGTCTCGGT ACATCACCGG CATCACGCTG CCGATCGACG CCGGCCAGAT GGTCAAGTAG
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| Protein sequence | MAGRVAGKVA LITGAARGQG RSHAVRLAQE GADIIAVDLC ADVPGVPYPG GTREDLAETV
RQVEALDRRA VATVADVRDH EQLAAAVVGG VAEFGRLDVV SANAGIAMPP FPTHEMPEEV
WQGMLAVNLT GVWHTCKAAI PHLIAGGRGG SIILTSSAAG LRGYENIANY VAAKHGVVGL
MRTLANELAR HSIRVNSVHP TTVSTEMIQN ESTYRQFRPD LTDTPTEDDV RDAFTSLNLI
PVPWIESIDV SNALLFLASD ESRYITGITL PIDAGQMVK
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