Gene Franean1_4482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4482 
Symbol 
ID5672832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5348558 
End bp5349469 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID641243349 
Productaldo/keto reductase 
Protein accessionYP_001508765 
Protein GI158316257 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.967515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGT GTTCCACCGA ACTATTGCAA GGTCAGCGGA TCGGCTTCGG CACCGCCGGC 
CTTTCCGTCG CTGTGCCGGC GCCACGGGAT GTCGCCCGAT CCGTGGTGCA CGCGGCGCTC
GACGCAGGAG TCCGACTCCT TGATACCGCC GCGTCCTACA TACCTGACCA CCAGGCGGTG
GGCCATAACG AAAAGGTGAT TGCGGACGCC CTCTCGGCCT GGACCGGCGA TCGGTCGTCG
GTCATTGTCA GCACCAAGGG CGGAATGATC CGAGCGACCA CGATCGACTA TTCCACCGAC
CTGGCCACCT GTGGCTGTCG TCGCTGTATC ATCAGCGACT GCGATACCAG CCTGCGGGCG
CTCGACGTCG ACCAGGTCGC CCTGTACCAG CTGCATGCGC CGGACCCCCG TACACCGATC
GAGGAATCGG TTCGGACAAT GGCCGAACTA CAACAGGCGG GAAAGATCCG CGAGATCGGT
CTGTCGAACA TCGGCCTCGA CGACCTCACC CGTGCCGAGA GCGTCACCCG AATCGCCTCC
GTTCAGAACC GTCTCAATCC GGCTGACCTG GCCAGTCTGG CCGTCCTCCG GGCCTGCGAG
AAGAGCGGAA TACTTTTCCT GGCCTACTCC CCGCTCGGCG GCCTCGGCGG CGCGGCGCGA
CGACTCGCGG CTCGCAGCGA GGCGTTCGCC GGTGTGGCCG GCGCCAAGGG AACCTCCACA
CAGAGCGTCA TACTGGCCTG GGAACGGGCG CTCTCACCGG TGCTGGTACC CGTTGTCGGA
GCCCGGCGCC CGGAAACGAT CCGCGACAGC GCGTCGTTCT CGACCATGCG ACTCACCGAC
GAGGAAGTCG CGCTCCTGGA TGCCGCGGTG GGCTTGCCAG GCCTGGACAG TCCGGCCGAA
AATCTCGGTT GA
 
Protein sequence
MPMCSTELLQ GQRIGFGTAG LSVAVPAPRD VARSVVHAAL DAGVRLLDTA ASYIPDHQAV 
GHNEKVIADA LSAWTGDRSS VIVSTKGGMI RATTIDYSTD LATCGCRRCI ISDCDTSLRA
LDVDQVALYQ LHAPDPRTPI EESVRTMAEL QQAGKIREIG LSNIGLDDLT RAESVTRIAS
VQNRLNPADL ASLAVLRACE KSGILFLAYS PLGGLGGAAR RLAARSEAFA GVAGAKGTST
QSVILAWERA LSPVLVPVVG ARRPETIRDS ASFSTMRLTD EEVALLDAAV GLPGLDSPAE
NLG