| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4479 |
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| Symbol | |
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| ID | 5672829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5344346 |
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| End bp | 5345605 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243346 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001508762 |
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| Protein GI | 158316254 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGGC GAAAGCAGGT CAGGGTGAGA TCCGAAGGCT CCGCACCGAG GGGCAGATTC
CTGGTGGTCG TGGGGGCGAG CGCGCTGGGC GTCGTCACGG TCGTGATGCC CTCGCTGCTG
CTGGGTGCCC TGGCGCCGCA GATCAAGATG GATCTCGGCA TCGACGACGT GGCCATCGGG
GTGGTGAGTA CCGTCTACGG GGGCGCGGGC GCCGCCGTAG CGCTGTTCGC TGGCGGGCTC
GCGGATCGCA TCGGGTGGTC CCGGGCCATG ATGGCGGCGA ATTCCGCCGC CGCCGTCAGC
TGCGTCGGGG TCGGGCTGCT GGCCGGGTCG TACGGAATTC TGCTCGGTTG CATGTTCCTC
GCCGGCTGCG CGATGGGCCT GGGCATGCCC GCGTGCAGCC TTCTCCTGGC CAGCGAGGTC
GGCGCGCATC AGCATGGGTT CGTCTTCGGC ATCAAGCAGG CGGCGACGCC CGCGGCGGCT
CTGCTGGCTG GTCTCGCGGT GCCGCTCGTG GGCCTGACCC TCGGCTGGCG CTGGGCCTAC
GGAGCCGTGA GCGTGCTGGC GGTCGCTGCG GCGGTGCTGA GCCGCCGCAT CCGGACGCTG
CAGGCTCCCG GTCCGGCCGC GGGCGGCACA GCGGCGACGC ACCGGGCCGG CGGCGTCGCG
ATGCCGAAGG GACGCCCCAG CGTCGCTGTG ATCCTCCCGC CGACGTCGGC TGCCGCTGGC
GCGTCGATCG CGATGGGGGC GGTGCTGGCG TTCGTTGTGC TGTCCGCCGT CGAGGCCGGC
CTCTCGCAGA GTAGTGCCGG GATTCTGCTG GCTGTCGGGA GCACCGCCGG TATCGCCGTC
CGTATCGGTG GCGGGTGGTG TCTGGACCGT GGTGACGTGT CGGCGTTCCA GTTGTGCGGA
TGGATGATTC TTGCTTGCGC GCTCGGTGCG GGAGCGATGG GGACCCGCGA CACCGTGCTG
GTGGTCGCGG GTGCGATCGT GGCGCTGAGC GTGGGGTGTG GCTGGGCCGG CCTCTTTGAC
GTCGGCCTTG TGCGGGGCAG TCCGCTCGCT CCCGCGCGGG CGTCAGGCCT GGGCCAGGTC
GGCACGGCGG GCGGGGCGGC GGTGGGCCCG CTGCTGTTCG GACTCACGGT CGGTTGGTGG
GGCTACCAGG TCGGCTGGTA CAGCATCGCG GTGCTGTCGA TGACCTCGGC CGGCGTGATG
CTGTGGGCTG CCCGGCGCGC CCGGAGATCG GTACTGGCCA CAGTCACTGC TGCGCCGTGA
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| Protein sequence | MPRRKQVRVR SEGSAPRGRF LVVVGASALG VVTVVMPSLL LGALAPQIKM DLGIDDVAIG
VVSTVYGGAG AAVALFAGGL ADRIGWSRAM MAANSAAAVS CVGVGLLAGS YGILLGCMFL
AGCAMGLGMP ACSLLLASEV GAHQHGFVFG IKQAATPAAA LLAGLAVPLV GLTLGWRWAY
GAVSVLAVAA AVLSRRIRTL QAPGPAAGGT AATHRAGGVA MPKGRPSVAV ILPPTSAAAG
ASIAMGAVLA FVVLSAVEAG LSQSSAGILL AVGSTAGIAV RIGGGWCLDR GDVSAFQLCG
WMILACALGA GAMGTRDTVL VVAGAIVALS VGCGWAGLFD VGLVRGSPLA PARASGLGQV
GTAGGAAVGP LLFGLTVGWW GYQVGWYSIA VLSMTSAGVM LWAARRARRS VLATVTAAP
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