| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4476 |
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| Symbol | |
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| ID | 5672826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5340390 |
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| End bp | 5341211 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641243343 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508759 |
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| Protein GI | 158316251 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAAAG TTCAGGGCAA GGTGGCATTC GTGACGGGCG CCGGGCGGGG GCTTGGAAGG
AGCTTCGCTG CCCGGCTGGC CGAGGAGGGC GCGGACATCA TCGCGACGGA CGTCTGTTCA
CCTGTGTCGT CGGCGCCGTA CGGAATGGCG AGTTCGTCGG ATCTTGACCA GACCGTGGCG
GAGGTCCGGG CGCTTGGCCG ACACGCGGTC GCGTTCGAGT CCGACGTCCG GGACGGGGAG
TCGATTCAGG CGGGGCTGGC CAAGGCGGTC GTCGAACTCG GCCGCCTCGA CATCGTGTGC
GCGAACGCAG GTTTCATCTC CTACGGTGCC GCGGTCGATC TCGCCGAGAC CGAGTGGAAC
GAGATGATCG ATGTCCATGT GACTGGCGCC TGGAACACCT GCAAGGCTGC CGTGCCCTAT
CTGATTCGGT CCGGTGTGGG AGCATCCATA GTCTTCACCA GCTCCATGGC GGGTCTTCGT
GCCCGCCCGG GCATCGGCCA TTATGTCACG GCCAAACACG CGGTTGTCGG CCTGATGCGC
ACCTTCGCGA TCGAACTGGC GCCGTTCGGC GTCCGGGTCA ATTCAGTGCA TCCGACGTCG
ACGAACACGC AGATGATTCA GAACAGCGCG ACCCGTCAGG TGGCCGACGG AGACGGAGCG
GACGGTTCGG TCGAGGAGCG CAGGAAGTCC GGCAGGCTCC TCGATGTGCC GTGGATCGAG
GCGATCGACG TGGCGAACGC TGTCCTCTTC CTCAGCTCGG AGGATGCCCG CTACATCACC
GGGGTGACGT TGCCCATCGA CGCGGGTGCC ATGTTGGTCT GA
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| Protein sequence | MAKVQGKVAF VTGAGRGLGR SFAARLAEEG ADIIATDVCS PVSSAPYGMA SSSDLDQTVA
EVRALGRHAV AFESDVRDGE SIQAGLAKAV VELGRLDIVC ANAGFISYGA AVDLAETEWN
EMIDVHVTGA WNTCKAAVPY LIRSGVGASI VFTSSMAGLR ARPGIGHYVT AKHAVVGLMR
TFAIELAPFG VRVNSVHPTS TNTQMIQNSA TRQVADGDGA DGSVEERRKS GRLLDVPWIE
AIDVANAVLF LSSEDARYIT GVTLPIDAGA MLV
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