| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4475 |
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| Symbol | |
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| ID | 5672825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5339499 |
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| End bp | 5340341 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641243342 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508758 |
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| Protein GI | 158316250 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG ACGGGCAACT GTCAGGAAAA GTCGCGCTCA TCACCGGAGC CGCGCGGGGG
CAGGGGCGTT CCCACGCCAT GCTCCTGGCT CAGGAAGGCG CGGACATCGT AGCTGTCGAC
ATCGCGCGAC AGATTGACTC GGTTCGGTAT CCGCTGGCCA CCGAGGATGA GCTCCGGGAG
ACGGCCGAAG CGGTCAGCGG GCTCGGCCGG CAGGTGATGT GCAAGGTGGC GGACGTTCGT
TCGTCCGAGC AGCTGTCCGC GGTCGTCGAC AAGGCGATGG AACGCTTCGG GCATATTGAC
ATCCTCTGTG TCAACGCCGG TATCGCACAG TTCGCGAAAG CCGTGTGGGA GCTCACCGAT
CAGGAGTGGC GCGACATCCT CGACGTCAAC CTCACCGGAG CGTGGAAGAC GGTGAAGGCA
GTGGCCCCCG CCATGACGGG AACAGGGCGG GGCGGTTCGA TCATCGTGAC GGCTTCCTCC
ACCTCGCTCA AGCCGCGGCC CAACCTCGGC GCCTACAACA CGTCGAAACA TGGCCTCACA
GGTCTCGTCG GCTCGCTCGC GATCGAACTC GCACCCGCCG GCATCCGGGT GAACGCCATC
GCCCCGGGCT CCGTGTCGAC GCGCATGCTC CTGAACGAAA ATGTTTTTCG GGTCACCCGA
CCCGATCTCG ATGACCCGAC CGAGAAGGAT GCTTACGAAC CGCTGCGCAA GCTCAACGTA
CTGCCCGTGC CCTGGGTCGA ACCAGTGGAC ATCAGCAACG CTGTCCTCTG GCTTGCCTCC
GAGAGTTCGC GTTATGTCAC CGGTGTGATG CTTCCGGTCG ATGCCGGCTC GGTCATCATC
TGA
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| Protein sequence | MTTDGQLSGK VALITGAARG QGRSHAMLLA QEGADIVAVD IARQIDSVRY PLATEDELRE
TAEAVSGLGR QVMCKVADVR SSEQLSAVVD KAMERFGHID ILCVNAGIAQ FAKAVWELTD
QEWRDILDVN LTGAWKTVKA VAPAMTGTGR GGSIIVTASS TSLKPRPNLG AYNTSKHGLT
GLVGSLAIEL APAGIRVNAI APGSVSTRML LNENVFRVTR PDLDDPTEKD AYEPLRKLNV
LPVPWVEPVD ISNAVLWLAS ESSRYVTGVM LPVDAGSVII
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