| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4462 |
|---|
| Symbol | |
|---|
| ID | 5672813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5330530 |
|---|
| End bp | 5330916 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641243330 |
|---|
| Product | IS1647-like transposase |
|---|
| Protein accession | YP_001508746 |
|---|
| Protein GI | 158316238 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTGGCGGT TTCGGACGGG TGGGCAGTGG CGGGAGATGC CGGCGGAGTT CGGTGCCTGG
CCGACGGTCC ACAACCGGTT CCGGCAGTGG CGGGACGCCG GTGTCTTCGA AGCCCTGCTG
GAGGGCATGG TCGCCGAGGC CGCGAAGCGG GGTGAGGTGG ACCTGTCCCT GGTCAGTGTG
GACTCCACCA CCGCCCGGGC GCACCACGAC GCTGCCGGGA TGCACCTGGC CGAGGACGTG
ATCGCCGCCC TGGAGAAGGC CGCCACCGAG GAGGAGAAGA CCCGGCAAAA AGGGGCGGCA
CGCAGGGACA AGACGGGCAG AACGTCGTGG ACGACCCCGG GCGGGAGCAA CGGCGACGCC
TCCGGCGCCG ACGCAAGGTC CGGCTGA
|
|---|
| Protein sequence | MWRFRTGGQW REMPAEFGAW PTVHNRFRQW RDAGVFEALL EGMVAEAAKR GEVDLSLVSV
DSTTARAHHD AAGMHLAEDV IAALEKAATE EEKTRQKGAA RRDKTGRTSW TTPGGSNGDA
SGADARSG
|
|---|
| |