| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4442 |
|---|
| Symbol | |
|---|
| ID | 5672794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5307379 |
|---|
| End bp | 5307663 |
|---|
| Gene Length | 285 bp |
|---|
| Protein Length | 94 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641243311 |
|---|
| Product | transposase, ISlxx5 |
|---|
| Protein accession | YP_001508727 |
|---|
| Protein GI | 158316219 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC ACGACGAGTT CACCGCTGCC ACCGGTGTCC CGGTCTACTT CTGCGAGCCC
GCCAAACCCT GGCAACGCGG CTCGAACGAA AACACGAACG GGCTGCTGCG CCAGTACTTC
CCGAAGGGCA CCGACCTGTC CGTCCACACC GCGGCCGATC TGGCGGCCGT CGCTGCCGAA
CTCAACGCGC GGCCCCGCAA GATCCTCGGC TGGACGACTC CGGCGAGTCA GCTCGATAAG
CTCGTCGCAA CACTCGACCT CCCGGATGTT GCAATCATCG GCTGA
|
|---|
| Protein sequence | MSRHDEFTAA TGVPVYFCEP AKPWQRGSNE NTNGLLRQYF PKGTDLSVHT AADLAAVAAE
LNARPRKILG WTTPASQLDK LVATLDLPDV AIIG
|
|---|
| |