Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4439 |
Symbol | |
ID | 5672791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5305136 |
End bp | 5305888 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641243308 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001508724 |
Protein GI | 158316216 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCTA CCGGAGACCT CGAAGGCAAG GTCGCGATCG TGACCGGTGC CGCCAACGGG ATCGGCGTCG CGATCGCGAC GCGGTTCGTC ACCGAAGGCG CCAAGGTCGT CATCGCCGAC ATCGACGCCG GTGGTCAGGG CGTCGCCGCG GAGCTTGGTG AGCGCGCCAC TTTCTTCAGC ACTGACGTCT CCGACCCCGT TCAGACTCAG GCACTCGTCG ACTTCACGAT CAGGCACTTC GGCGGACTTC ACGTGCTGTG CAACAACGCC GGTGTGTCCG GTGGGCTGCG GCGATTCCTC GACGACGACC TGCGCGACTT CGAACGTGTA GTGGCCGTCG ACCTATACGG GGTCATGGCC TGCAGCCGCA GCGCCGCCCG GCACATGGTC GATCACGGCG GCGGCGCCAT CGTCAACATT GCCTCAGGAG CCGGGATCAC CCCCGGAATC GGGATGCTGC CCTATCGGGC AGCAAAGGCC GGCGTCGTCC AGTTCACCCG GTGCCTGGCG GTGGAGGTGG GCGAGCACGG CATCAGGGCC AACTGCATCG CCCCCGCCAA CATCTCCACA GACATCAACG CCGCATTCGA CAAGGCCACC GTCATCCGCC TGCAGCCGTT GCCGCACCAG GGCAGGACCG GCGACATCGC CGAGGCCGCG CTTTACCTCG CCAGCGACCG CGCCGCCCAC GTCACCGGCC TGGTCCTCGC TGTCGACGGT GGTATGTCCC TCGGGACACC ACCACGTCGC TGA
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Protein sequence | MTATGDLEGK VAIVTGAANG IGVAIATRFV TEGAKVVIAD IDAGGQGVAA ELGERATFFS TDVSDPVQTQ ALVDFTIRHF GGLHVLCNNA GVSGGLRRFL DDDLRDFERV VAVDLYGVMA CSRSAARHMV DHGGGAIVNI ASGAGITPGI GMLPYRAAKA GVVQFTRCLA VEVGEHGIRA NCIAPANIST DINAAFDKAT VIRLQPLPHQ GRTGDIAEAA LYLASDRAAH VTGLVLAVDG GMSLGTPPRR
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