| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4431 |
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| Symbol | |
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| ID | 5672783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5292752 |
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| End bp | 5295556 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641243300 |
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| Product | hypothetical protein |
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| Protein accession | YP_001508716 |
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| Protein GI | 158316208 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4354] Predicted bile acid beta-glucosidase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.402809 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGAGA GAGAATTATC CGGCGCACAC CGTGGCGGTG GCGTCTCGCG CAGGACCTTC
GTGCGCGGTA CAGCCGCGGC GGCCGGCTTG GCGGCGTTCG GCGGTGCGCT TGCTGCCTGC
ACCGGAAGCG AACCCGCGGC TGCGGTGAAG CCGGCGGTTC ACCCTGTGCC CAAGGCGGCA
TATGTCCGCA AGCTAGGCGC GGTGCCAGCG GGGTCCTGCA ACGCGCTCGG GGATCAGCAG
TGCAGGACGG GAGTCCCGAA CCCCGTGTTC CGCAGTGTGG GGGCGGGCCT GTCCGTACCC
GGCCTGGGCC TCCCGCTCGG GGGCGTCGGC GGCGGCTCTT TCATGCTCAA CCAGTGTGGG
ACGTTCGGAC CGTGGAACAT GGGCGGGCAG CCGACCACGG AATTCTGGGA GATGCGCACC
CTCGCGCAGG CGGCGTTCCA CGCACGTGAG GAGGTCGTCG GGGGCGGCGG GGGTGTGTCG
GTCAGGACAC TGGCCGTACC GCACACCAAC ACCGCTCCTG ATCGCACTTT TGGCGACGTC
CTGCCTGCCT GGAACACGCT GAAGCCCGGG GACGGCAGCT ACGCTGTACT CTTCCCGTTC
GGGTACATGA CCTACAGCGG CTTCCAGTCA AAGGTCTCCA CCAAGATCTG GTCGCCGATC
GTGGCCAACG AGGACGAGCG CACGTCGATG CCGGTGGCGT TCTTCGACAT GCTCATGAAC
AATCCCACCG CCAAGCCGAT CAAGATTTCT GTCATGCTGA CGTTCCCGAA CGCCCCGGCG
TTCGCCACGG GTTCGGTGCG GACTGGTCTT TACAGCAGGT TCGATCGCGA TTCCGCGTCG
GGTATAGGCG GGGTGACCCT CGGCTCGGAC TCCCCGGAGA ACACGCCGGA CACTGTGACG
TCCGAGTGGA CCATTGCCGC GCATCCATTC GCCGGGCAGA CACTCACCTA CTGCACCTCG
TGGGACGGAT CGGGCGACGG GAGCGACATC TACGCCCCGT TCTCCGCGGC TGGCGCGGAC
GGGAAGCTGC CGAACGGCGA CATCGACCAG TCGGCATCGG CCGGTGCGGT GGCCGTGGCG
CTCACCCTGG AGCCCGACCA GACACAGACT GTTCGCTTCG CCCTTTCCTG GGACTTCCCG
CAGGTCTATT ACGACGGCGA GGACGCGACG ACGAGGGCCG TCTGGATGCG TCGGTACACG
GCGTTCCTCG GCGGAAAGAC ATCGCGGACC AACGACTACG TCCAGGATTC GTACCCCTTC
AGGCAGGGTT TCACCATCGC CCGGAAGGAG CTGGCCCGGT ACGATGACTC TCTCGCCGCC
GTCGAGTCGT GGTGGAAGCC GATCGCCGAG AATCCACAGG TTCCGCCGTG GCTACGCAAG
GCTTCTCTGA ACGAGCTGTA TCACATGATC TTCAACGGTT CGTTCTGGGA GTCCGGGCTC
GTCAGCAACA CGATGCCGAT GAGTGTCGAA GAGGGAACCT CGCCTCGTCT GGGATCCGCG
ATCCCGGAAA CCCACATCTA TTTCCACGCC GATGGCGGGG ACGGTGGAGC GCAGACGAAC
GAAGTCGACA TGGACAGCTC CGGCTACCTC GTTTTCGCGA AGCTGTTCCG CAGCTTGGAG
CTGGGTCGTG TTCGCCCGCT GCTTCAGATG GTCAGGCAGA ATCCGCTGGG AATCGGGCGC
GTGATTCAGC AGACCTTCAG AAGTTCGGGA CCCTACATCA CCCAGACGGC GTCATTCCAG
AATCTCCCGT TCTCCAAGCC GCCCACAGCG GGAAACCCTC CCGCTCCGCC CACCAGAGAT
CTCGGTGATC TGTTCGCGGA CGAAGCCGGA GATCCCTTTC GTGACTGCCC GCACAAGCTC
ATCTACCGAA CGTACGCGCT GATCAAGTTC TACGACGACG ACGATCTGCT GGAATACGGA
TACGCGCCGA TGCTGAAGGC GCTGACATAC TCGCAGTTCT TCCGTCCGAC CGGCTCCCAC
CTGCCGGCAG ACCCGGCATC CAACAACCCG CCGAACACTA TGGATCAGGC TGTCGTGAAC
GGTCACGGAA TCTACAACTG CGGGCTGTAT CTGCTGTCGC TTCAAATCCT CTCGACGCTG
ACGCCCCAGG CTGCCCGACT CGGTGTTGAC GAGGCCACAC CTGAGATACA GAAGGAACTC
GACGAGGAAC TGGCGGCAGC GAAGGAGGAA TTCGAGAGGA TCTTCTGGAA CCCGGCCACC
GGTCGATACC GCTACTGCGA CGGCACCGGC GGGATCGGAG ATCGTACCGG TACTATCAGG
GGTCGTTTCA AGCCGGTGCC GCCGCCGGAC GCCATCTGGC TCGAGTCCTT CGCCGGTCAG
CTCGTCGCGA TGGAGCTCGG CCTGCCTGAC GTCGTCGATC TGGACCATGC CCGTACTCAC
CTGAAGAACA CTCTGGATTC ATTCGTCCGG TTCAGGGATC CCGAAGGGAA CCTGATGGGT
GGCCCGATTA TCCTCAAGCC GGACTTCAGT ATCTACCCTA GTTCGCTGAG GACCACAGAA
ATCAATGAAG TGATTCCGGG TATCGCCTTC CTGGCCGCCG CGGGAGCATT CCGAATCGGC
GCCAAGGTCA AGGACAAGGA CATCACGGAA AAGGCGTTGA AGCTCGGAGA GGGGTGTGCG
CTCCAGATCT ACGACATCGA GAGCAACGGT TACGCCTTCG CAACCCCCGA GAGCTGGTTC
GTGGACGACC ACCATATCTC CAGGTTTCCT GGATACACGC GAACCCGCTC TGTCTGGTCG
CTCTACGACG CGGTCAGCGA AATCTCGGTG AAGAAACCGT CCTGA
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| Protein sequence | MGERELSGAH RGGGVSRRTF VRGTAAAAGL AAFGGALAAC TGSEPAAAVK PAVHPVPKAA
YVRKLGAVPA GSCNALGDQQ CRTGVPNPVF RSVGAGLSVP GLGLPLGGVG GGSFMLNQCG
TFGPWNMGGQ PTTEFWEMRT LAQAAFHARE EVVGGGGGVS VRTLAVPHTN TAPDRTFGDV
LPAWNTLKPG DGSYAVLFPF GYMTYSGFQS KVSTKIWSPI VANEDERTSM PVAFFDMLMN
NPTAKPIKIS VMLTFPNAPA FATGSVRTGL YSRFDRDSAS GIGGVTLGSD SPENTPDTVT
SEWTIAAHPF AGQTLTYCTS WDGSGDGSDI YAPFSAAGAD GKLPNGDIDQ SASAGAVAVA
LTLEPDQTQT VRFALSWDFP QVYYDGEDAT TRAVWMRRYT AFLGGKTSRT NDYVQDSYPF
RQGFTIARKE LARYDDSLAA VESWWKPIAE NPQVPPWLRK ASLNELYHMI FNGSFWESGL
VSNTMPMSVE EGTSPRLGSA IPETHIYFHA DGGDGGAQTN EVDMDSSGYL VFAKLFRSLE
LGRVRPLLQM VRQNPLGIGR VIQQTFRSSG PYITQTASFQ NLPFSKPPTA GNPPAPPTRD
LGDLFADEAG DPFRDCPHKL IYRTYALIKF YDDDDLLEYG YAPMLKALTY SQFFRPTGSH
LPADPASNNP PNTMDQAVVN GHGIYNCGLY LLSLQILSTL TPQAARLGVD EATPEIQKEL
DEELAAAKEE FERIFWNPAT GRYRYCDGTG GIGDRTGTIR GRFKPVPPPD AIWLESFAGQ
LVAMELGLPD VVDLDHARTH LKNTLDSFVR FRDPEGNLMG GPIILKPDFS IYPSSLRTTE
INEVIPGIAF LAAAGAFRIG AKVKDKDITE KALKLGEGCA LQIYDIESNG YAFATPESWF
VDDHHISRFP GYTRTRSVWS LYDAVSEISV KKPS
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