| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4426 |
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| Symbol | |
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| ID | 5672778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5287771 |
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| End bp | 5289510 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243295 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001508711 |
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| Protein GI | 158316203 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTT CCTCTTCACA CCGTTCGCTG CTCGACTTCT ACGCCGACCC CGACGCGGGC
AGCTGGGATG AGGTCGGGTA CGTCCCCTAT CCGCTCGGGC CCCCGGCCGT CGACACACCG
GTCGTGGCCC GCCTGCGGAC GCGGGCGTTG TCTGACCTGC GTGAACGTTA CGACGCGGTC
GTTGTGGGAA GCGGAGCCGG TGGCGGTGTC GCCGCATTCG TGCTCGCGTC CGCGGGAGCA
TCCGTGCTCG TCGTCGAACG CGGCCAGTGG TACGGCGCGG GCGACCTCGC TACCGACCAT
ATCCGCAACC ACCGGTTCTT CCTCGGGGGC GACCTCGACA CACCCCCCGG GCACCCCCGG
GCAGTCCTCG GCGACGACGG TGAGATCGCG GTCGAGTCCG AGGACGGCCG CTACCACCAC
AACGCAATCA CCGTCGGAGG TGGCACCCGG TTCTTCGGCG CCCAGGCCTG GCGGTTCCGG
CCCGAGGACT TCCGGATGGC CTCCCTGTAC GGCGTCCCAG AAGGATCCGC GCTCGCGGAC
TGGCCGATCA CCTACGGTGA CCTCGAACCG TTCTACGACC AGGTGGAATG GGAACTCGGC
GTGGCCGGCC GCCCGCACCC CGATGACGCG CACCGCAAAC GCGACTACCC GATGCCCCCC
TTCCCGCCGA GCGCCCTGGC TGCCGCGCTC GCGGCCGGCG CCGACAGGCT CGGATGGCCG
ACGGGACCAA CCCCGTTGCT GCTGAACACC CGACCCCGCG CTGGCCGGGC CGCATGTATC
CGCTGCGGGA TGTGTGTCGG CTTCACCTGC CCCGTCGACG CCCGCAACGG CACCCACAGC
ACCGTCCTGC CCCGCGCCGT CGACCTCGGC GCCGACCTGA CTGTTGGCGC GCAGGTCACG
CGAGTATCCG CCGCCGGCGA CGTCGAGATC GCCGCCGGCG GCGCGTCACG CGTCATCCGC
GCCGGAACGG TCGTGCTCGC CGGCGGCGCG GTCGAGACCG CCAGGCTGCT CCAGCTCAGC
GGCCTGGGCA ACGACTGGGT CGGCGACTGC CTCCAAGGAC ACCTCTACGC AGGCGCGCTC
GGCGTGTTCG ACGAGCCGGT CCACGACGGA CTCGGACCAG GCCCGTCCAT CGCGACCAGA
CGCTTCGCCC ACGGAAACGA CAGCGTCGTC GGTGGAGGCC TGCTCGGGGA TGACTTCGTC
AGGCTCCCCG TCATGCACTA CTTCATGACC CGCCTCATGG GACTTTCCCC CGACGTCAGC
CAGGCGGACG TGCGTCGCGC CATGGCGGAG AGTTACCGCC ACACCGGCAT CGTCTCCGGG
CCGGTCCAGG AAGTGACGAT TCGCGGCGCA CGCGTCCGGT TGGCGTCAGG CGTGACCGAC
CACCTCGGCC TCCCTGTGGC CCGACTCGAA GGTTTCCATC ATCCCGAGGA CCTCCGAACC
GTCGCGTTCC TCACCGACCG AGCCGAGGAA TGGCTACACG CATCCGGCGC TCGCCAAACC
TGGCAGATAG GCCCGATGAA GGAAACGACA CTATCCGCGG GCCAGCACCA GGCAGGCACC
GCGCGCATGT CCGACTCACC CCGCCACGGC GCAACCGACC CGTTCGGCAA AGTCTGGGGA
ACAGATCGCG TATACGTCGC CGATGCAAGC CTCCACGTCA CCAATGGCGG CGCAAACCCC
GTCCTCACCA TCATGGCCCT CGCCTGGCGA ACCGCAGCAC ACATCGCCGC CAGCGGATAA
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| Protein sequence | MNRSSSHRSL LDFYADPDAG SWDEVGYVPY PLGPPAVDTP VVARLRTRAL SDLRERYDAV
VVGSGAGGGV AAFVLASAGA SVLVVERGQW YGAGDLATDH IRNHRFFLGG DLDTPPGHPR
AVLGDDGEIA VESEDGRYHH NAITVGGGTR FFGAQAWRFR PEDFRMASLY GVPEGSALAD
WPITYGDLEP FYDQVEWELG VAGRPHPDDA HRKRDYPMPP FPPSALAAAL AAGADRLGWP
TGPTPLLLNT RPRAGRAACI RCGMCVGFTC PVDARNGTHS TVLPRAVDLG ADLTVGAQVT
RVSAAGDVEI AAGGASRVIR AGTVVLAGGA VETARLLQLS GLGNDWVGDC LQGHLYAGAL
GVFDEPVHDG LGPGPSIATR RFAHGNDSVV GGGLLGDDFV RLPVMHYFMT RLMGLSPDVS
QADVRRAMAE SYRHTGIVSG PVQEVTIRGA RVRLASGVTD HLGLPVARLE GFHHPEDLRT
VAFLTDRAEE WLHASGARQT WQIGPMKETT LSAGQHQAGT ARMSDSPRHG ATDPFGKVWG
TDRVYVADAS LHVTNGGANP VLTIMALAWR TAAHIAASG
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