Gene Franean1_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4417 
Symbol 
ID5672769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5275140 
End bp5275697 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content67% 
IMG OID641243285 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001508702 
Protein GI158316194 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG AGTTCGCCCC GCCTGACGTC GTCACCATCC CATCCGTTCT CACTCCGCGG 
CTGAAGCTCC GTTCCTGGCG CCTGACGGAC GTCGAGCCGT ACCTGGCGAT GGCCCGGCAT
CCGGATATGT CGCTCTATAC GAGCTCACCG AGCCGTGTCG GGTCGGTCTG GGGCATGACC
GCGTTCCAGA TCGGCCACTG GGCTCTGAAC CGCTTCGGAA TGTGGATCAT CGAAGAGCGG
GCGACGGGTG AGTTCCTCGG CCGGGCCGGC CTGTACGAGG AGTACGGCTG GCCGGACATT
GAGGTGGCAT GGACCGTCCG GCGCGACCGG TGGGGGCAGG GCATCGCAAC CGAGGCCGGC
GCGGCTGCGC TGGAGTTCGC GTTCACTGAG GCCGGCCGGG AGCGGGTCAT CAGCATCATC
CACCCGGAGA ACAAGGGGTC GATCCGCGTC GCCGAGAAGC TCGGCCTCAC CCTCGCTGAA
GGCCCGGTGG ATCGGGACGG TGAACCGCGG AACATCTACG CGATCAGCCG CGCCGAGTGG
GCTACTCACA CAGGCTGA
 
Protein sequence
MTLEFAPPDV VTIPSVLTPR LKLRSWRLTD VEPYLAMARH PDMSLYTSSP SRVGSVWGMT 
AFQIGHWALN RFGMWIIEER ATGEFLGRAG LYEEYGWPDI EVAWTVRRDR WGQGIATEAG
AAALEFAFTE AGRERVISII HPENKGSIRV AEKLGLTLAE GPVDRDGEPR NIYAISRAEW
ATHTG