Gene Franean1_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4406 
Symbol 
ID5672758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5262219 
End bp5262698 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID641243274 
Producthypothetical protein 
Protein accessionYP_001508691 
Protein GI158316183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.462576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGATA GGCCTTCCCC CGGAGGCGAT CGGACACCTA TACCCCTACC CGGCCAGTAC 
GCCACGGAGT TCGACATCAC GGTGTCCGCC CTCGGCAACA AGATCACCGA TGCGGCCGAC
GTCGCATTCC TCCGAGACCA GATCGGCGAC GATCTACGCG TCTGCTTCCA CCAGTCCGCC
CCCGTCCGGG CGCTCGAACA GGGCCGCCCG TTCCACCTCG ACGACCTCGA ACCCGCCAAC
CAGGCTGCCC TGGCCGAGCT ACTGGCCGCC GTGGACACCA CCATCCGCGA CCCGCAGCGA
TTCCTCACGC AGATGCACGA GATCCACCGC CGCAACGCCC GCGCCTGGGC CAACGACAGC
ATCGGAACCG ATCTCACCAC CCAGATCGAC CCCGACTACC AACCTCCGTA CCTGCCAGTT
CCCACGCCGC GTAGCGCCTC CGCCGCCAAC ACTGCCAGCG AGGACGCCAT CACAGCGTGA
 
Protein sequence
MIDRPSPGGD RTPIPLPGQY ATEFDITVSA LGNKITDAAD VAFLRDQIGD DLRVCFHQSA 
PVRALEQGRP FHLDDLEPAN QAALAELLAA VDTTIRDPQR FLTQMHEIHR RNARAWANDS
IGTDLTTQID PDYQPPYLPV PTPRSASAAN TASEDAITA