Gene Franean1_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4397 
Symbol 
ID5672750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5243331 
End bp5243849 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID641243266 
Producthypothetical protein 
Protein accessionYP_001508683 
Protein GI158316175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.746728 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGC TGCGACGTCA GGGGAGTCGT CCGACGCTGG ATCCGGCGGA TCGGGTGATC 
CACGCAGCCC TGTCCCGGCT GCTACCCCGG TCCAGCTGGG GTTCGTCCTT CGTCACCCCA
GCCACCGTGC TGCGCTGGCA CCGTGACCTC CTCGCACGAA AATGGATCTA TCCCCGGAAA
TCGCCCGGAC GGCCACCGGT CCGCCGGGAG ATCCGCGAGC TGGTCCTGCG CCTCGCGAAG
GAGAACCCGA CCTGGGGCCA CCGCAGGAGG AACCTGCTGA TGGATCTCGA GGAGCGCAGC
CACCGGTTCC GGTTCCTCAT CCGTGACCGC GATACTAAAT TCACGGCTTC CTTCGACGCT
GTCTTCACCG GAGCCGGTAT CGACATGGCG CACACACCAC CGCAATCCCC GCAGGCGAAC
GCGATCGCGG AACGCTGGGT CGGCACCGTC CGCAGGGAAT GCACCGACAG GCTGTTGACC
GTCTCCGAAC GGCACCTGAC GTCAGTCCTC ACCAGCTAA
 
Protein sequence
MAVLRRQGSR PTLDPADRVI HAALSRLLPR SSWGSSFVTP ATVLRWHRDL LARKWIYPRK 
SPGRPPVRRE IRELVLRLAK ENPTWGHRRR NLLMDLEERS HRFRFLIRDR DTKFTASFDA
VFTGAGIDMA HTPPQSPQAN AIAERWVGTV RRECTDRLLT VSERHLTSVL TS