Gene Franean1_4388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4388 
Symbol 
ID5672741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5235413 
End bp5235904 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID641243257 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001508674 
Protein GI158316166 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAC GTCGGGTGAC CATCCGGCCA CTGGGCCGGC CCGGGGACCT GGGCTGGGTG 
GTGATGGCGC ACGGCGAGCT CTACAGCCGG GAGTTCGGCT GGGACAGCAG CTTCGAGGGG
CTTGTCGCCC GGATCGTTGC CGACTACGCA GCGGAGAAGG ACGCCGGACC GCAGCAAGCA
TGGATCGCGG AAGTGGACGG GGTGCGGGCA GGGTGCGTCT TCTGCGTACG CGGGGATCAG
CGGACCGCGA AACTGCGCGT TCTCCTTGTC GATCCCGCCG CGCGCGGACT GGGTCTCGGG
GCCCGCCTCG TCGGGGAGTG CGTGGACTTC GCGCGGGACG CGGGCTATGG GGCGATCTCC
CTGTGGACCA ACGATGTGCT CCACTCGGCC CGCCGCATCT ACCAGAAACA GGGTTTCGAG
CTCGTCGCCG AACAGGCCCA CCGCAGTTTC GGGCGCGACC TCGTCGGCCA GACTTGGCAG
CGTCCCCTGT AA
 
Protein sequence
MAERRVTIRP LGRPGDLGWV VMAHGELYSR EFGWDSSFEG LVARIVADYA AEKDAGPQQA 
WIAEVDGVRA GCVFCVRGDQ RTAKLRVLLV DPAARGLGLG ARLVGECVDF ARDAGYGAIS
LWTNDVLHSA RRIYQKQGFE LVAEQAHRSF GRDLVGQTWQ RPL