Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4385 |
Symbol | |
ID | 5672738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5233008 |
End bp | 5233259 |
Gene Length | 252 bp |
Protein Length | 83 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641243254 |
Product | DNA binding domain-containing protein |
Protein accession | YP_001508671 |
Protein GI | 158316163 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2452] Predicted site-specific integrase-resolvase |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCAAA TGCCGAACAT CGAGTCAATG CTGACACCTG GCGAGGTAGC CACACTCTTT CGCGTAGACC CGAAGACCGT GACCAGGTGG GCGAGGGCCG GCAAGCTGAC ATCGATCCGA ACCTTGGGCG GCCACCGCAG ATACCGCGAG GCCGAGGTAC GCGCTGCCCT CAAGGGCTCG AACGAGCCCT CCACCTGGGA GCAAAATCCA GATCCGCACC TCCGGACGCC ACTGAACCGA ACTCCCGACT GA
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Protein sequence | MVQMPNIESM LTPGEVATLF RVDPKTVTRW ARAGKLTSIR TLGGHRRYRE AEVRAALKGS NEPSTWEQNP DPHLRTPLNR TPD
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