| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4385 |
|---|
| Symbol | |
|---|
| ID | 5672738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5233008 |
|---|
| End bp | 5233259 |
|---|
| Gene Length | 252 bp |
|---|
| Protein Length | 83 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641243254 |
|---|
| Product | DNA binding domain-containing protein |
|---|
| Protein accession | YP_001508671 |
|---|
| Protein GI | 158316163 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2452] Predicted site-specific integrase-resolvase |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCAAA TGCCGAACAT CGAGTCAATG CTGACACCTG GCGAGGTAGC CACACTCTTT
CGCGTAGACC CGAAGACCGT GACCAGGTGG GCGAGGGCCG GCAAGCTGAC ATCGATCCGA
ACCTTGGGCG GCCACCGCAG ATACCGCGAG GCCGAGGTAC GCGCTGCCCT CAAGGGCTCG
AACGAGCCCT CCACCTGGGA GCAAAATCCA GATCCGCACC TCCGGACGCC ACTGAACCGA
ACTCCCGACT GA
|
|---|
| Protein sequence | MVQMPNIESM LTPGEVATLF RVDPKTVTRW ARAGKLTSIR TLGGHRRYRE AEVRAALKGS
NEPSTWEQNP DPHLRTPLNR TPD
|
|---|
| |