| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4364 |
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| Symbol | |
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| ID | 5672719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5214077 |
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| End bp | 5214898 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641243237 |
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| Product | putative integral membrane sensor protein |
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| Protein accession | YP_001508654 |
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| Protein GI | 158316146 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACCG CAGCAAATCC GACCGTGGTA AGCCTCGCGG CCGCCCACCC CCATCTGGAT
GCGTCCTACA ACCTGTATTT CGTCGGACTT TCCTATGGCT TAGCGGTGCT CGGCTCCTTT
GCGGCCCTGG CCAGCGCGAC CCGGATCCGG GAGTACCGCG GGGCCAAGCG GCTTGGCTGG
GCGGCGGTGA CGGCCCTGGC GCTGGGTGGC GGCGGGATCT GGTCGATGCA TTTCGTCGGG
ATGGTCGCCT ATCACATCGA GGTCCCCGTC AGCTTCGACC TCCGGATCAC CCTGCTGTCG
CTCGTCATCG CGGTCGCCGT CTCCGGGGTG GGAATCTGGG TGGTGGCCGC AGACCCGTTC
AACACCGACA GGCTCGTTCG TGGCGGCATC TTCGCAGGGC TGGGTATCGC GGCGATGCAC
TACACCGGGA TGGCGGCGAT GCGGACCGCC GGGGCGATCG ACTACAGCCC CAGCTTGGTG
TTGATCTCTG TTGTCATCGC CACAGTGGCC GCCACTGTCG CCTTCTGGAT CGCGTTCCGT
GTCGGCGGCA TCATCCGGGT CCTCAGCGCA TCCGCGGTCA TGGCTGGCGC GGTCTGCGGG
ATGCACTACA CGGCGATGGC GGCAACCCGT GTCACGCCCG ATCCGAGCCT GTATCCACAG
GTCGGATGCG ACCCGTTCAC GCTGGGCATT CTCACCACGT TCGGGTCGAC CATCGTGCTG
ATGTTCATCA TCGTCACCGC GCTCGGCGGT GTCACCAGCC CCGAGTTCCA TGTCCGCAGA
ATCTGGCAAG ACAGGATCTT CGTCTCGTCT CAGAAGCCGT GA
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| Protein sequence | MGTAANPTVV SLAAAHPHLD ASYNLYFVGL SYGLAVLGSF AALASATRIR EYRGAKRLGW
AAVTALALGG GGIWSMHFVG MVAYHIEVPV SFDLRITLLS LVIAVAVSGV GIWVVAADPF
NTDRLVRGGI FAGLGIAAMH YTGMAAMRTA GAIDYSPSLV LISVVIATVA ATVAFWIAFR
VGGIIRVLSA SAVMAGAVCG MHYTAMAATR VTPDPSLYPQ VGCDPFTLGI LTTFGSTIVL
MFIIVTALGG VTSPEFHVRR IWQDRIFVSS QKP
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