Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4363 |
Symbol | |
ID | 5672718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5212896 |
End bp | 5213747 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641243236 |
Product | transposase IS4 family protein |
Protein accession | YP_001508653 |
Protein GI | 158316145 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCT GTCGTGAACC AGCGCAAGCC GTACCCTGCG ACCTGTCGGA CGCCCGGTGG GCGCTGATCG CCCCGACCCT GCACACCTGG CGCCAGGCCC GGCTCGACCG CCGGCCCACC GGCCAACCAG CCCAGGTCGA GCTGCGTGAG ATCTTCAACG CGATCCTGTA TGTCAACCGG ACAGGGATCG CCTGGAAATA TCTGCCCCAC GACTTCCCGC CGCACGGCAC CGTCTACTTC TACTTCGCCG CCTGGCGGGA CGAGGGAATC TTCGCCCAGC TCAACTACGA CCTGACCGGC CTGGCCCGAG CCAAGGCCGG CCGCACCCCC GAACCGACCG CGTGCATCCT CGACACCCAG AGCGTCAAGA CCTCCACCAA CGTGCCCCTG AGCAGCCAGG GCACGGACGC CAGCAAGAAG ATCGTCGGCC GGAAGCGAGG CATCGTCACC GACACCCTCG GCCTGATCCT CGCCGTGACC GTCACCGCCG CGCATCTGTC GGACAACACC ATCGGAATAC GCCTGCTCGA CCAGGCCAAG AACACCTACC ATGCGATATC CAAGACCTGG GTCGACACCG GCTTCAAAAA CACCGACATC GAACACGGGG CCACCCTCGG CATCGACGTC GAAGTCGTTC CCAGAAAAAC CGGGACCCGC GGCTTCCACG TCGTGAAACG ACGCTGGGTC GTCGAACGCA GCCTGGGCTG GCTCATGCTG CGCCGCCGCC TGGCCCGCGA CTACGAGAAC CTCCTCACCA GCTCCGAAGC GATGATCCAC ATTGCCGCGA TCGACAACCT CGTCAGGCGC ATAACGGACG AGACCACCCC AACCTGGCGA GGCACCTACT AA
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Protein sequence | MSVCREPAQA VPCDLSDARW ALIAPTLHTW RQARLDRRPT GQPAQVELRE IFNAILYVNR TGIAWKYLPH DFPPHGTVYF YFAAWRDEGI FAQLNYDLTG LARAKAGRTP EPTACILDTQ SVKTSTNVPL SSQGTDASKK IVGRKRGIVT DTLGLILAVT VTAAHLSDNT IGIRLLDQAK NTYHAISKTW VDTGFKNTDI EHGATLGIDV EVVPRKTGTR GFHVVKRRWV VERSLGWLML RRRLARDYEN LLTSSEAMIH IAAIDNLVRR ITDETTPTWR GTY
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