| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4339 |
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| Symbol | |
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| ID | 5672694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5183477 |
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| End bp | 5184100 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243212 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001508629 |
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| Protein GI | 158316121 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00746452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACGCC CGCGGTCCCG GCCGGGTCGC GCTCCTAGAC TCACGTGGAT GACGGGCGGG
CGCCGGCGCA GTGAGAGCTC GCGGCGGGCG ATCCTCGACG CGGCCCGCGG CCTGCTGCTC
GAACGCGGTT ACGAACGGTT GACGATCGAC GCCGTCGCCG CCCAGGCCGG CGTCGGAAAG
CAGACGATCT ATCGCTGGTG GGGGTCGAAG GGCGCCGTCG TCGCCGATGC GGTGCTCGAG
GGCGGGCTCG TGCCACCGTT CGTCCCCTTG CCCGACACGG GAGACATCGA GGCCGATCTG
CGCGCCTGGC TGCGGGCCTG GACCGCGCAT CTGGCCTCCG GTGTGGGCAC GAGCCTCATC
CTCGCCCTCA CGGCGGCCAC GGCCGAGGAC CGCGCCGTCG CCGATGTCCT CTACGAGCGC
TTCACCGGAC CCCACGAGCA GCTCCTGTGC GACCGCCTGG AGAGTGCCCG CGCGGCGGGT
CAGCTCGGGT CGCAGGTGCC GGTCCCGACG ATCGCCGGCG TGCTGATCGG TTCCCTGCTT
TATCGCGTCC TCAGCAGGCA GGCACCGCCG ACGGCGGACG ACGCCGACAT GGTCGTGCGC
CTGGTGCTCG CCGGGGTTGC CTGA
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| Protein sequence | MIRPRSRPGR APRLTWMTGG RRRSESSRRA ILDAARGLLL ERGYERLTID AVAAQAGVGK
QTIYRWWGSK GAVVADAVLE GGLVPPFVPL PDTGDIEADL RAWLRAWTAH LASGVGTSLI
LALTAATAED RAVADVLYER FTGPHEQLLC DRLESARAAG QLGSQVPVPT IAGVLIGSLL
YRVLSRQAPP TADDADMVVR LVLAGVA
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