| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4327 |
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| Symbol | |
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| ID | 5672682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5169519 |
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| End bp | 5170412 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243200 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508617 |
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| Protein GI | 158316109 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTGGT TCGAGGACAG AGGCGGGCTG GCGGGCAGCG TCGCCGTGGT CACCGGGGGA
GCGGGGGGCA TCGGCGGGGC CGTGACCACC GACCTGGCGG CCAACGGCGT GCGCCTCGCG
GTGGTCGACA TCGACAAGGA CGCGATCGAC GCGCTGCAGG CCGCGCTGGA TGAGCAGGGC
GCCGAGGCGA TCGTGCACCA CGGCGACGCC CGCGACCCCG ACGTGCTCGC GGCGCTGTTC
GCCGCCGTCG ACGAACGCTG GGGACGGGTC GACACCCTGG TCAACGTCGT CGGCGGCACC
TTCCGCGCAC CCTTCGTGGA GACCAGCCCG AACGGCTGGA ACGCACTGCT GCGCATGAAC
CTCATGCACG TGCTGCACGC CTGCTCGCTG GCCGCGCCCC GGATGCAGGC GGGTGGGCGC
GGCGGCAGCA TCATCAACCT GACCACCATC GAGGCGCACC GGGCCGCCCC CGGGTTCGCG
GTCTACTCGG CGGCCAAGGC CGCGGTGGAG CAGTTCGGCC GGACCCTGGC CGTGGAGCTC
GCCCCCGACC GGATCCGGGT CAACAACGTC GCCCCCGACT ACACCCCGAC TCCCAACATG
ACCAAGATGA CAGGCGGCGA CGGCGCGTAC TCGACCGAGG TCGGGATCCG CGTCGGCATC
CCGATGGGCC GGGCCGGCGA GGTCGCCGAC GTGTCCGGCT GCGTGGTCTT CCTCGCTTCC
GGTCTCTCGA CCTACGTCAC CGGCTCGACC CTGCACCCCG ACGGCGGCAC CTACGCCTCG
TCGGGATGGC TGAACTGGCC GGGCACCGGT TTCTCGAACC ACGCACCGTC GCACGTCCTG
GCGAACCTGG GAGCGACCGG CGCCGACCCG TCGGCCGCAG GGGAAGCCGG CTAG
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| Protein sequence | MGWFEDRGGL AGSVAVVTGG AGGIGGAVTT DLAANGVRLA VVDIDKDAID ALQAALDEQG
AEAIVHHGDA RDPDVLAALF AAVDERWGRV DTLVNVVGGT FRAPFVETSP NGWNALLRMN
LMHVLHACSL AAPRMQAGGR GGSIINLTTI EAHRAAPGFA VYSAAKAAVE QFGRTLAVEL
APDRIRVNNV APDYTPTPNM TKMTGGDGAY STEVGIRVGI PMGRAGEVAD VSGCVVFLAS
GLSTYVTGST LHPDGGTYAS SGWLNWPGTG FSNHAPSHVL ANLGATGADP SAAGEAG
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