| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4326 |
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| Symbol | |
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| ID | 5672681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5168304 |
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| End bp | 5169449 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641243199 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_001508616 |
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| Protein GI | 158316108 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGC TCCTGCTCCG GAGCCTCACA CCGAGCGTGC TCGGGATCCT CGTCCGCCGC
GGAGCCGACT TCGCGGCGGC CGAGGACGCC GTGCAGGACG CGCTGGTCGA GGCGGTCCGT
GTCTGGCCGG CCGACCCGCC GCGGGACCCG AAGGGCTGGC TGGTCACCGT GGCCTGGCGC
CGGTTCCTCG ACGCGACCCG GGCGGACACC TCCCGCCGCC GGCGGGAGGA CCTCGCCGAC
GAGGAACCGG CGCCCGGGCC CGCGCCCGCG GTCGACGACA CGCTCCAGCT CTACTTCCTG
TGCGCCCACC CGTCGCTGAC ACCGTCGTCC GCGGTCGCGC TCACGCTGCG CGCCGTCGGC
GGGCTGACCA CCCGCCAGAT CGCCCAGGCC TACCTGGTGC CCGAGGCGAC CATGGCGCAG
CGCATCAGCC GGGCCAAGCG CACCGTCACC GGCGTGCGGT TCGACCAGCC CGGCGACGTC
GCCACCGTGC TGCGCGTCCT CTACCTGGTC TTCAACGAGG GCTACTCCGG TGACGTCGAC
CTCGCCGCCG AGGCCATCCG GCTCACCCGG CAGCTCGCGG CCGCGATTGA CCACCCCGAG
GTGGCGGGGC TGCTCGCCCT CATGCTGCTC CACCACGCCC GGCGCGCCGC CCGGACCGCG
CCCGACGGCA GCCTCATCCC CCTCGCCGAG CAGGACCGCC GCCGGTGGGA CACCACGTCG
ATCGCCGAGG GCGTCGCAAT CCTGCAGGCG GCCCTCGCCC GCGACCAGCT GGGCGAGTTC
CAGGCCCAGG CCGCCATCGC GGCACTCCAC GCCGACGCAC CCACCACCGA GGAGACAGAC
TGGGTGCAGA TCGTCGAGTG GTACGACGAG CTCACGCGCC TGACCGACAG CCCGGTCATC
CGCCTCAACC GCGCGGTGGC CGTCGGCCAG GCCGACGGAC CGCGCGCCGG CCTGGCGGCG
CTCGCGGCGC TGGACGACTC ACTACCCCGC CACGCGGCCG TGGCGGCCTA CCTCCACGAA
CGCGACGGCA ACCTGGCGAC CGCGGCACGG CTGTACGCCG AAGCAGCCCA CAAGGCACCC
AATCTCGCCG AACGCGACCA CCTGACCCGC CAGGCCGCCC GACTCAACAC CCACCGGTGC
CACTGA
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| Protein sequence | MDELLLRSLT PSVLGILVRR GADFAAAEDA VQDALVEAVR VWPADPPRDP KGWLVTVAWR
RFLDATRADT SRRRREDLAD EEPAPGPAPA VDDTLQLYFL CAHPSLTPSS AVALTLRAVG
GLTTRQIAQA YLVPEATMAQ RISRAKRTVT GVRFDQPGDV ATVLRVLYLV FNEGYSGDVD
LAAEAIRLTR QLAAAIDHPE VAGLLALMLL HHARRAARTA PDGSLIPLAE QDRRRWDTTS
IAEGVAILQA ALARDQLGEF QAQAAIAALH ADAPTTEETD WVQIVEWYDE LTRLTDSPVI
RLNRAVAVGQ ADGPRAGLAA LAALDDSLPR HAAVAAYLHE RDGNLATAAR LYAEAAHKAP
NLAERDHLTR QAARLNTHRC H
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