Gene Franean1_4306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4306 
Symbol 
ID5672661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5144644 
End bp5145633 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID641243179 
Productoxidoreductase FAD-binding subunit 
Protein accessionYP_001508596 
Protein GI158316088 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.264864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.490555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGAG CCCCTCTGTT CCAGAGGGCG ACCGTCACCC GGACCGTTCA CGAGACCGCT 
GACGCGCGTA CCTTCGTGCT CGCTCCGCGC GAGGGATCGT TCACGTACCG GGCCGGCCAG
TTCGTCACGT TCCGGGTGCA GATCGACGGC GAGGAGCTCC TGCGCTCGTA TTCGATGTCC
AGCGCCCCGG AAACCGACTC CGAGCTCATG ACCACCGTAA AGCGGGTGCC GGGCGGCCGG
GTGTCGAACT GGCTGATCGA CAACGTCAGC GCGGGCGACG AGGTCGAGGT CACCGAGCCC
AAGGGCATCT TCTGCCTGCA GGAGAGCGAC GTCCCCCTGC TGGGTTTCTG CGGCGGCAGC
GGAATCACCC CGATCATCTC GCTCGCCAAG AGCGCACTGT CGGGCACGGA CCGCACTGTC
CGGCTGCTGT GCGCCGACCG CGACCAGCCC TCAATGATCT TCGAGCGGGC GCTGGCGGAA
CTCGTCGAGA AGTACCCGGA CCGCCTTTCC GTCGTGCGGC ACCTCGACGC CGACCGCGGA
TTCCTCGACG ACGCCGCCAT CAAGGCGTTC GTCGGTGCCG ACGGCAACGC CGACTGCTAC
ATCTGCGGCC CCGAGCCGTT CATGGATCTC GTCGAGAGGG CGTTTCCCGG GCCCGGGCGG
GTCTTCGTCG AACGCTTCGG CACCCCGGCC AGCAGTGAGC CCGCCGGCGA GGAGGTCGAG
GGAACCGTCA CCATCATCCT GGGCCGGAAG AAGATCTCCG TAACCAGGCG CGAGGGCGAG
ACCTTCCTCG AAAGCGCGCG GCGCGGCGGC CTGGCCCCGC CGTTCTCCTG TGAGTCCGGA
ACCTGCGCCA CCTGCATCGC GAAGCTGGTG GAGGGCACCG CGACGATGCG GGTCAACGAC
GCCCTCACCC AGGACGAGAT CGACGACGGC TACGTTCTGA CCTGTCAGGG AGTGCCCGAC
TCTTCCTCGG CCGTCGTCCG CTACGAGTGA
 
Protein sequence
MPRAPLFQRA TVTRTVHETA DARTFVLAPR EGSFTYRAGQ FVTFRVQIDG EELLRSYSMS 
SAPETDSELM TTVKRVPGGR VSNWLIDNVS AGDEVEVTEP KGIFCLQESD VPLLGFCGGS
GITPIISLAK SALSGTDRTV RLLCADRDQP SMIFERALAE LVEKYPDRLS VVRHLDADRG
FLDDAAIKAF VGADGNADCY ICGPEPFMDL VERAFPGPGR VFVERFGTPA SSEPAGEEVE
GTVTIILGRK KISVTRREGE TFLESARRGG LAPPFSCESG TCATCIAKLV EGTATMRVND
ALTQDEIDDG YVLTCQGVPD SSSAVVRYE