| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4302 |
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| Symbol | |
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| ID | 5672657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5140311 |
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| End bp | 5141075 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243175 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508592 |
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| Protein GI | 158316084 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0898136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.741174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCA GCGGAAACTC CGCCCTCGTC GTCGGTGGTA CCGGCGGCCT CGGTGAGGCC
ACCGTCCGCC GTCTCCACGC CGCGGGCGCG AAGGTCGTCG TGGCCGACGT CGCGGACGAG
AAGGGCAAGG CGCTGGAGTC CGAGCTGGGC ATCCGCTACG TCCACGTGGA CGCCACCTCC
GAGGAGGACA TCCTCGCCGC GATCGCCGAG GCCAAGACGC TGGGCCCGCT GCGGATCTCG
GTCGACACCC ACGGTGGCCC GGCCGGCGGC GGCCGGCTCG TCGGCAAGGA CGGCTCGCCG
CACAGCCTGG ACGCCTTCAC GACGACCGTC ACGTACTACC TGACCGCGGT GTTCAACGTG
ACCCGGCTGG TGGCGGCCGC CATCGCCCAG GAGGAGCCGC TCGAGGGCGG CGCCCGGGGC
GTCATCGTCA ACACCGCGTC GATCGCCGGC TTCGAGGGCC AGATCGGCCA GATCGCCTAC
GCCGCCGCCA AGGGCGGCGT CATCTCCATG ACGCTGGTCG CCGCGCGTGA CCTGTCGCCG
CTGGGCATCC GGGTGAACGC GATCGCTCCG GGCACCATCC TCACCCCGGC CTACGGCAAG
GCCGGCGAGA AGCTGGAGGC CTACTGGGGC CCGCAGGTCC CCTTCCCGAA GCGGATGGGC
CAGTCGCCCG AGTACGCCTC GCTCGCCGAG CAGCTCATCA CCAACGACTA CCTCAACGGC
GAGGTCATCC GCCTCGACGG CGCGCTGCGC TTCCCGCCGA AGTAG
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| Protein sequence | MQISGNSALV VGGTGGLGEA TVRRLHAAGA KVVVADVADE KGKALESELG IRYVHVDATS
EEDILAAIAE AKTLGPLRIS VDTHGGPAGG GRLVGKDGSP HSLDAFTTTV TYYLTAVFNV
TRLVAAAIAQ EEPLEGGARG VIVNTASIAG FEGQIGQIAY AAAKGGVISM TLVAARDLSP
LGIRVNAIAP GTILTPAYGK AGEKLEAYWG PQVPFPKRMG QSPEYASLAE QLITNDYLNG
EVIRLDGALR FPPK
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