Gene Franean1_4297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4297 
Symbol 
ID5672652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5135110 
End bp5135901 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content68% 
IMG OID641243170 
Productenoyl-CoA hydratase 
Protein accessionYP_001508587 
Protein GI158316079 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.51425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAGTCC TATACGACGT CGCCGACGGG ATCGCGACGA TCACGCTCAA CCGCCCCGAG 
GTCGCGAACG CGCAGAACGG ACCGCTCCTC GAGGAGCTCG ACGCGGCGTG GACGAAGGCG
GCGGCCGACA AGGACGTGGC GGTGATCGTG CTGCGCGCGG AGGGGAAGCA CTTCTCCGCC
GGGCACGACC TGAAGTCCGG TCAGCCGCTC CCCGAGAAAA TCACCCTGGA GATGCTCTAC
GAGCTGGAGG CACGGCGCTA CCTGGAGTTC TCGCTGCGGT GGCGCAACGT TCCCAAGCCG
TCGATCGCGG CGGTGCAGGG GCGCTGCATC TCGGGCGGGC TGCTGCTGTG CTGGCCGTGC
GACCTGATCA TCGCGGCCGA GGACGCGCTG TTCTCCGACC CCGTCGTCGC CATGGGCATA
GGCGGTGTCG AGTACCACGG GCACACCTGG GAGCTCGGCC CGCGCAAGGC CAAGGAGATC
CTCTTCACCG GGCGCGCGGT GACGGCCTCC GAGGCCGAGA AGATCGGCAT GGTCAACAAG
GTGGTGCCCC GCGACCAGCT CGACACCGAG ACCCGCGCGC TGGCCCAGCA CATCGCGACG
ATGCCCAGCT TCGGGCTCCG GCAGGCCAAG CGCGCGGTCA ACCAGACCCT CGACGTGCAG
GGCTTCTACG CCGCGATCCA GTCGGTGTTC GACGTCCACC AGACCGGGCA CGGCAACGCG
CTGAGCGTCA GCGGATGGCC GGTCCTGGTC AACCTGGACC AGATGAAGTC AGCGATCAAG
AAGGCCGACT AG
 
Protein sequence
MLVLYDVADG IATITLNRPE VANAQNGPLL EELDAAWTKA AADKDVAVIV LRAEGKHFSA 
GHDLKSGQPL PEKITLEMLY ELEARRYLEF SLRWRNVPKP SIAAVQGRCI SGGLLLCWPC
DLIIAAEDAL FSDPVVAMGI GGVEYHGHTW ELGPRKAKEI LFTGRAVTAS EAEKIGMVNK
VVPRDQLDTE TRALAQHIAT MPSFGLRQAK RAVNQTLDVQ GFYAAIQSVF DVHQTGHGNA
LSVSGWPVLV NLDQMKSAIK KAD