Gene Franean1_4293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4293 
Symbol 
ID5672648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5131229 
End bp5131588 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content69% 
IMG OID641243166 
Producthypothetical protein 
Protein accessionYP_001508583 
Protein GI158316075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.697042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATCA CCCAGGGTGA CGTCGAGGGG CTGCTCTCGG TCTTCACCCC GGACGGCACC 
TACAGCGCCT TCGGTGACGT GTTCACCCTC GACCTGTTCC CGAAGATGGT CGCGGCCGCG
CCGAAGGGCC TGTTCCTGAC CGGGACGGCG CTGGTCGACA TCGACGGCGA CGAGGCGACC
GGAACCCAGC CGCTGTGCTT CATCGAGCAC TCGAAGCACG ACATGCGGAT CGGGTACTAC
TCGGACACCT ACCGCCGCAC GCCGGACGGC TGGCGGCTGC GCACGCGCAA GATGACCTTC
ATCCGGCGCA GCGGGGCGCA CGACTCGGGG CGGCCGCACG CCTACGAACC GACCCCGTGA
 
Protein sequence
MTITQGDVEG LLSVFTPDGT YSAFGDVFTL DLFPKMVAAA PKGLFLTGTA LVDIDGDEAT 
GTQPLCFIEH SKHDMRIGYY SDTYRRTPDG WRLRTRKMTF IRRSGAHDSG RPHAYEPTP