| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4290 |
|---|
| Symbol | |
|---|
| ID | 5672645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5128400 |
|---|
| End bp | 5129671 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641243163 |
|---|
| Product | Rieske (2Fe-2S) domain-containing protein |
|---|
| Protein accession | YP_001508580 |
|---|
| Protein GI | 158316072 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.502996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCCACT TCAGCAAGCC CCCGGCGGGG AGCTGGACCG AGAACTATCC CGAGCTCGGC
ACCGCGCCCG TCGACTACAA CGACTCGATC GACCCCGAGT TCTACGAGCA GGAGCGCGAG
GCGATCTTCA AGCGCTCCTG GCTGAACGTG GGCCGGGTCG AGCGCCTCCC CCGCACCGGC
AGCTACTTCA CCAAGGAGCT GCCCGCCGCC GGGACGTCCC TGATCATCGT CAAGGGCGGC
GACGGCAAGG TGCGCGCGTT CCACAACGTG TGCCGGCACC GCGGCAACAA GCTGGTGTGG
AACGACTTCC CGGGTGAGGA GACCGCCGGC AGCTGCCGGC AGTTCATCTG CAAGTACCAC
GCCTGGCGTT ACGACCTCAC CGGCGAGCTG ACCTTCGTCC AGCAGGAGGG TGAGTTCTTC
GACCTGGACA AGAAGCAGTT CGGCCTCAAG GAGGTCGCCT GTGAGGTCTG GGAAGGCTTC
ATCTTCATCA ACCTGAACCC GCAGGAGACC CTCACCGAGT ACCTCGGTGA CATGGCCAAG
GGCCTCGAGG GCTACCCGTA CTCGGAGCTG ACCGAGGTCT ACTCCTACCG GGCCGAGGTC
GGCGCCAACT GGAAGCTGTT CATCGACGCT TTCGCGGAGT TCTACCACGC GCCCGTCCTG
CACCAGAAGC AGGCCGTCAA GGGCGAGTCC GAGAAGCTCA TCGGCTACGG GTTCGAGGCG
CTGCACTACC AGTTGTTCAG CCCGCACTCG ATGGTGTCCT CCTGGGGCGG CATGGCCCCG
CCGAAGGACC CGTCGATGGT CAAGCCGATC GAGCGCGTGC TGCGCAGCGG CCTTTTCGGC
CCCTGGGACA CCCCCGAGGT CGACGGCCTC GAGGTCGAGA AGCTCCCGAC GGGGATCAAC
CCGGTGAAGC ACAAGTCCTG GGGCACCGAC TCGTTCGAGA TCTTCCCCAA CTTCACGCTG
CTGTTCTGGA AGCCGGGCTG GTACCTGACG TACCACTACT GGCCGACCGC GGTGAACAAG
CACACGTTCG AGGCGAGCCT CTACTTCGCC CCGCCGAAGA ACGCCCGCGA GCGACTGGCC
CAGGAGCTGG CGGCGGTGAC GTTCAAGGAG TACGCGCTCC AGGACGCCAA CACCCTCGAG
GCCACCCAGA CGATGATCGG TACCCGTACC GTCACCGAGT TCCCCCTGTG CGACCAGGAA
ATCCTGCTCC GGCACCTGCA CAAGGTCGTC GGCGACCGAG TCAAGGAGTT CAGCGATGCC
GCTGCCGTCT GA
|
|---|
| Protein sequence | MPHFSKPPAG SWTENYPELG TAPVDYNDSI DPEFYEQERE AIFKRSWLNV GRVERLPRTG
SYFTKELPAA GTSLIIVKGG DGKVRAFHNV CRHRGNKLVW NDFPGEETAG SCRQFICKYH
AWRYDLTGEL TFVQQEGEFF DLDKKQFGLK EVACEVWEGF IFINLNPQET LTEYLGDMAK
GLEGYPYSEL TEVYSYRAEV GANWKLFIDA FAEFYHAPVL HQKQAVKGES EKLIGYGFEA
LHYQLFSPHS MVSSWGGMAP PKDPSMVKPI ERVLRSGLFG PWDTPEVDGL EVEKLPTGIN
PVKHKSWGTD SFEIFPNFTL LFWKPGWYLT YHYWPTAVNK HTFEASLYFA PPKNARERLA
QELAAVTFKE YALQDANTLE ATQTMIGTRT VTEFPLCDQE ILLRHLHKVV GDRVKEFSDA
AAV
|
|---|
| |