Gene Franean1_4287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4287 
Symbol 
ID5672642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5125113 
End bp5126534 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content75% 
IMG OID641243160 
Productaldehyde dehydrogenase 
Protein accessionYP_001508577 
Protein GI158316069 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.323555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCC GTCACGACCA CTGGATCGGC GGGAAGGCTG CGGCACCGGC CGGCGGGAGC 
TACCTGCCCA CGCTCGACCC CTCGACCCGC GAGCCCGGTG ACGAGATCGC CGCCGGCTCC
CCCGTGGACG TCGACCGTGC CGTCACCGAC GCAGCGGCGG CCCAGCCGCA GTGGGCGCGG
CGGTCGGGGG CGGAGCGCGG CGAGCTGCTC CACCGGGTCG CCGACGTCAT CGACGCGCAC
GCGGCTGAGC TGATGGAGCT GGAGCGGGTG GCCACCGGCA AGATCGCCAC CCAGCTCCGG
TTCGAGGTCG AGCAGTCCGC CGCCTACTTC CGGTACTACG CCGGGGTGGT GCGCGCGCAC
CACGGGCGCA CGATCGACCT GGGCGGGGGC AGCCACACCT ACACCCGGTT GGAGCCGTAC
GGGGTCGTCG CGGCGATCAC CCCGTGGAAC CTGCCACTGA ACCAGGCGTG CCGGGCGCTG
GCCCCGGCAC TGGCCGCGGG CAACGCCGTG GTGGTCAAGC CGTCCGAGCT GACGTCGATC
TCCACCATCC GCCTCGCGCG GCTGGCGAGC GAGGCCGGGC TCCCGGACGG CCTGTTCAAC
GTCGTGGCCG GAACCGGACC CGAAGTCGGG ACCCCGCTGG CCGCCGACCC GCGGGTCGGG
CGCGTCACCT TCACCGGCTC GGTCGCCACC GGGCGGCACC TGGCCCGGAT CGCGGCCGAC
CGGCTCGTGC CGGCGACCCT CGAGCTCGGC GGCAAGTCTC CCCTGGTGGT CTTCGCGGAC
GCCGACCTGG ACCGGGCGGC CGCCGCCGCG GTCTCGACCG TCGCGACCAA CTCCGGGCAG
GTGTGCTCGG CGACGACCCG GCTGCTCGTC GAGGCGTCCG TGCACGACGA GCTGGTCGCC
CGGGTGGTCG CGGCGGTGGA ACGGCTCGCC CCGGGCGTGG ACTTCGGCCC GATCATCACC
GAGGCGCAGT ACCGGAAGGT GCTGGACTTC TTCGCACGGA CGCTGGCGTC CGGGCTGCGG
CCGGCCACCG GGGGCGCCGC CTACGCCGAC GGCCCGGGCG CGAAGGGCCT GTACATCCGG
CCCACCGTCT ACGCCGGGGT GGCGCCGCAC CTGCCGGTGG CCCGCGAGGA GGTCTTCGGC
CCGGTCCTGG TGACACTGCC GTTCGAGGGC GAGGACGAGG CCCTCGCGCT CGCCAACGAC
AGCGAGTACG GCCTCGTCGG CAGCGTCTGG AGCGGGGACG TCGCACGCGG CCTGCGGCTG
GCGGAGCGGA TCGAGGCCGG CCAGGTTGCC GTGAACGGCG GCCCGCTCAC GGTCGAGACG
CCGTTCGGGG GCTACAAGGC CAGCGGTTAC GGCCGGGAGA AGGGCATCGA GGCCCTGCAC
GAGTACGCCC GGGTGAAGAC CGTCAGCCTG TCGCTCTACT GA
 
Protein sequence
MTVRHDHWIG GKAAAPAGGS YLPTLDPSTR EPGDEIAAGS PVDVDRAVTD AAAAQPQWAR 
RSGAERGELL HRVADVIDAH AAELMELERV ATGKIATQLR FEVEQSAAYF RYYAGVVRAH
HGRTIDLGGG SHTYTRLEPY GVVAAITPWN LPLNQACRAL APALAAGNAV VVKPSELTSI
STIRLARLAS EAGLPDGLFN VVAGTGPEVG TPLAADPRVG RVTFTGSVAT GRHLARIAAD
RLVPATLELG GKSPLVVFAD ADLDRAAAAA VSTVATNSGQ VCSATTRLLV EASVHDELVA
RVVAAVERLA PGVDFGPIIT EAQYRKVLDF FARTLASGLR PATGGAAYAD GPGAKGLYIR
PTVYAGVAPH LPVAREEVFG PVLVTLPFEG EDEALALAND SEYGLVGSVW SGDVARGLRL
AERIEAGQVA VNGGPLTVET PFGGYKASGY GREKGIEALH EYARVKTVSL SLY