| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4285 |
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| Symbol | |
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| ID | 5672640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5122203 |
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| End bp | 5122955 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243158 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_001508575 |
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| Protein GI | 158316067 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.191358 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACAGGT TGGACAAGGT GGTTCCGAAC GCGGAGCTCG CCGTGGCGGA CATCCCCGAC
GGGGCCTCGC TGGCGGTGGG CGGATTCGGG CTCTGTGGCA TCCCGAGTGG CCTCATCCGC
GCGTTGCTCG CCGCCGGCCC CAAGGACCTC GAGACGGTCA GCAACAACTG CGGCGTGGAC
GACTGGGGCC TCGGCCTGCT GCTGCGGGCG GGGCGGATCC GGCGCACCAC CGGCTCCTAC
GTCGGGGAGA ACAAGGAGTT CGAGCGCCAG TTCCTCTCCG GTGAGCTCGA GGTCGAGCTC
GTTCCGCAGG GCACCCTGGC CGAGCGGCTG CGCGCCGGCG GCGCCGGCAT CCCGGCCTTC
TACACCCCCG CGGGCGTCGG GACCCAGGTG GCCGAGGGCG GCCTGCCGTG GCTGTACGAC
GGCTCCGGCG GCATCGCGGT CGCCTCGCCG CCCAAGGAGA CCCGGGTCTT CGACGACCGG
ACCTACGTCC TCGAGCGCGG CATAGTCTGC GACTTCGCCC TGGTCCATGC CTGGAAGGGC
GACCGGCACG GCAACCTGGT CTACCGGGCG AGCGCCGCCA ACTTCAACCC GCTGTGCGCG
ACGGCCGGGC GGGTCACCAT CGCCGAAGTC GAGGAACTGG TCGAGCCCGG CGAGCTCGAC
CCGGCCCAGG TGCACACCCC GGGGATCTTC GTCCAGCGGG TCGTGCACGC GCCCGACACG
GAGAAGCGGA TCGAGAAGCG GACGGTGAGC TGA
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| Protein sequence | MDRLDKVVPN AELAVADIPD GASLAVGGFG LCGIPSGLIR ALLAAGPKDL ETVSNNCGVD
DWGLGLLLRA GRIRRTTGSY VGENKEFERQ FLSGELEVEL VPQGTLAERL RAGGAGIPAF
YTPAGVGTQV AEGGLPWLYD GSGGIAVASP PKETRVFDDR TYVLERGIVC DFALVHAWKG
DRHGNLVYRA SAANFNPLCA TAGRVTIAEV EELVEPGELD PAQVHTPGIF VQRVVHAPDT
EKRIEKRTVS
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