| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4284 |
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| Symbol | |
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| ID | 5672639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5121554 |
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| End bp | 5122201 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641243157 |
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| Product | 3-oxoacid CoA-transferase, B subunit |
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| Protein accession | YP_001508574 |
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| Protein GI | 158316066 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.18483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCTGA CTCGTACCGA GCTCGCGGCC CGGGTCGCCC GCGAGCTCGA GAGCGGACAG
TACGTGAACC TCGGTATCGG CCTGCCGACC CTGGTTCCGA ACTACCTGCC CGACGGCGTG
ACCGTGGTCC TGCACAGCGA GAACGGCATC CTCGGCGTCG GCCCCTACCC GGCGGACGCC
GCCGTCGACC CCGACCTGAT CAACGCCGGC AAGGAGACCG TCACCGTCCT GCCCGGGGCG
GCCTTCTTCG ACTCGGCCAC CTCGTTCGGG ATGATCCGCG GCGGTCATGT CGACGTCGCG
GTGCTCGGGG CGATGCAGGT CTCCCGGGTC GGCGACCTGG CGAACTGGAT GATCCCCGGC
AAGATGGTCA AGGGCATGGG CGGCGCGATG GACCTCGTGC ACGGCGCCCG GCACGTGATC
GTGATGATGG AGCACGTCGC CCGCGACGGC AGCCACAAGA TCCTCGACGA GTGCACGCTG
CCGCTGACCG GCCGCGCCTG CGCTCAGCGG ATCATCACCG ACCTCGCGGT CATCGACGTC
GTGCCCGGCG GCGTCCTGGC TCTGCGCGAG ACCGCGCCCG GCGTGACCGT CGACGACGTC
CGCGCCGCCA CCGGCACTGA GCTCACCGTG GACCTGGTCG CCGTCTAA
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| Protein sequence | MALTRTELAA RVARELESGQ YVNLGIGLPT LVPNYLPDGV TVVLHSENGI LGVGPYPADA
AVDPDLINAG KETVTVLPGA AFFDSATSFG MIRGGHVDVA VLGAMQVSRV GDLANWMIPG
KMVKGMGGAM DLVHGARHVI VMMEHVARDG SHKILDECTL PLTGRACAQR IITDLAVIDV
VPGGVLALRE TAPGVTVDDV RAATGTELTV DLVAV
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