Gene Franean1_4253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4253 
Symbol 
ID5672608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5073078 
End bp5073560 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID641243126 
ProductNUDIX hydrolase 
Protein accessionYP_001508543 
Protein GI158316035 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.103812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.749922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGAGTG CCGTGCCGAA GGCAGATTAT TTCCAGGATC CTGACGCGCC CGCCGCCAAC 
AGCCTCACAC CGGTAGTGAA TGTCGCCATC CGAGACGATG CCGGCCGGCT GCTGCTCATC
CGGCGTTCCG ATGACGGCTA CTGGGCGCTG CCCGGCGGGT TCATGGACTG TGGTGAACGC
ATCGCCGACG CCGCTGCCCG CGAGGTGCGG GAGGAGACTG GCCTGATGGT GAAAGTGACC
GGGATCGTCG GACTCTACAC GGACCCGGCG CATGTCACCG CCTTCGACGA CGGCGAGGTG
CACCAGCAGT GCACCGTGTG TTTCCACGCC ACCGTCGTCG GCGGAACTCC GCGGCCAACG
GCCGAGGCGG CCTCCGTCGA CTACTACGCC GAGGAGCAGC TCACGGCCCT GAAAATCCAT
CCCGTAATGC GGCTCAGGAT CGAGCACTGC TTTACGGAGA ACCAGCCACC CTACATCGGA
TAG
 
Protein sequence
MWSAVPKADY FQDPDAPAAN SLTPVVNVAI RDDAGRLLLI RRSDDGYWAL PGGFMDCGER 
IADAAAREVR EETGLMVKVT GIVGLYTDPA HVTAFDDGEV HQQCTVCFHA TVVGGTPRPT
AEAASVDYYA EEQLTALKIH PVMRLRIEHC FTENQPPYIG