Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4253 |
Symbol | |
ID | 5672608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5073078 |
End bp | 5073560 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641243126 |
Product | NUDIX hydrolase |
Protein accession | YP_001508543 |
Protein GI | 158316035 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.103812 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.749922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGAGTG CCGTGCCGAA GGCAGATTAT TTCCAGGATC CTGACGCGCC CGCCGCCAAC AGCCTCACAC CGGTAGTGAA TGTCGCCATC CGAGACGATG CCGGCCGGCT GCTGCTCATC CGGCGTTCCG ATGACGGCTA CTGGGCGCTG CCCGGCGGGT TCATGGACTG TGGTGAACGC ATCGCCGACG CCGCTGCCCG CGAGGTGCGG GAGGAGACTG GCCTGATGGT GAAAGTGACC GGGATCGTCG GACTCTACAC GGACCCGGCG CATGTCACCG CCTTCGACGA CGGCGAGGTG CACCAGCAGT GCACCGTGTG TTTCCACGCC ACCGTCGTCG GCGGAACTCC GCGGCCAACG GCCGAGGCGG CCTCCGTCGA CTACTACGCC GAGGAGCAGC TCACGGCCCT GAAAATCCAT CCCGTAATGC GGCTCAGGAT CGAGCACTGC TTTACGGAGA ACCAGCCACC CTACATCGGA TAG
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Protein sequence | MWSAVPKADY FQDPDAPAAN SLTPVVNVAI RDDAGRLLLI RRSDDGYWAL PGGFMDCGER IADAAAREVR EETGLMVKVT GIVGLYTDPA HVTAFDDGEV HQQCTVCFHA TVVGGTPRPT AEAASVDYYA EEQLTALKIH PVMRLRIEHC FTENQPPYIG
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