| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4243 |
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| Symbol | |
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| ID | 5672598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5050990 |
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| End bp | 5052504 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243116 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001508533 |
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| Protein GI | 158316025 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.891003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTTT CCACCGACGT CGTCGGCGAC GGGCACCCGC CCGCCGCGGT CGGGTCACCA
GGGGCGAGTA GCCAGCTCGA CCCGCGACGC TGGCTGGCGC TCAGCATCAT CGCGGTCGCC
CAGCTCATGG TCGTGCTCGA CGCGTCGATC GTGACGATCG CCCTCCCGCA CGCCCAGAGC
GACCTGGGCA TCTCCACCGC CAACCGGCAG TGGGTCATGA CCGCCTACAC CCTGGCGTTC
GGCGGCCTGC TCCTGCTCGG CGGGCGCATC GCCGACTTCC TCGGACGCAA GAGGATCTTC
ATCTGGGGGC TGGTCGGCTT CGCGGCCGCC TCGGCGCTGG GCGGCGCCGC CCCCAACGCC
GAGTTCCTTT TCGCGGCCCG GGCCCTGCAG GGTGCCTGCG CGGCGCTCCT CGCCCCGGCG
GCACTCTCCC TGATCACCGT CACGTTCACC GAGGGCAAGG AGCGCGCCCG CGCGTTCGGC
GTCTACGGCG GGATCTCCGG TGGCGGCGCG GCGATCGGGC TCATCGTCGG CGGGCTGCTC
ACCGAGTACG CGTCCTGGCG CTGGTGCCTG TTGGTCAACG TCCCGATCGC CCTCGCCACC
GCCGCGGCCG CGCTGCCCAT CGTGCGGGAG AGCAAGGCCG AGGGCACGCC GAGCTACGAC
ATCCCCGGCG CGGTGACCGT CACCACCGGC CTGCTCGCGC TCGTGTACGG GTTCACCGTC
GCGGCCGACG ACGGCTGGGG CTCGGCGACC ACGATCGGCC TGCTCGCCGG CGCGGTGGCG
CTGCTCGCGG TGTTCGTCGT GATCGAGATG CGCACGGCCG CCCCGCTGCT GCCGATGCGC
GTGCCATTGG AGCGCAACCG AGGCGGCTCC TTCCTGGCGT CGCTACTCAT CGGCGGCGGC
CTGTTCGCGA TGTTCCTGTT CCTCACCTTC TACTTCCAGT CGACGCTCGG GTACAGCGCG
CTGCGCAGCG GCTTCGCCTT CCTCCCGTTC AGCGCGGGCA TCATCCTCTC GGCCGGTCTG
GCCAGCCAGT TCCTCCCCCG GGTGGGGCCG ACGATACTAA TGATCATCGG CACCGCGCTG
GCTGCCGGCG GGCTGGTCCT GCTTAGCCAG ATCGGGGCGG ACTCCAGCTA CGCGGGCCAC
GTCCTGCCCG CCGAGGTCCT GATCAGCCTC GGGATGGGCC TCGCGTTCGT CCCGATGTCC
AGCGTCTCCC TGCTGGGGGT CGCCGACCAC GACGCCGGTG TGGCGAGCGC GCTGGTCAAC
ACCACCCAGC AGGTCGGCGG GTCACTCGGC GTCGCGCTGC TGAACACCGT GTACGCGACG
GCGGTCTCGG ACTACCTGGG CTCGCACGGC ACCGGCGCGG CCGCGCAGCG GCAGGCGGCC
ATCGAGGGCT ACACCACGTC GTTCGTATGG AGCGCCGTGC TCGTGGGGAT CGCCCTGGTC
GCGGTGATCC TGCTGGTCCG TGCGGGCCGG GACGACGTCC CCGCGGTCGA CGGAGTGCCC
GTCCACGCCG GATGA
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| Protein sequence | MTVSTDVVGD GHPPAAVGSP GASSQLDPRR WLALSIIAVA QLMVVLDASI VTIALPHAQS
DLGISTANRQ WVMTAYTLAF GGLLLLGGRI ADFLGRKRIF IWGLVGFAAA SALGGAAPNA
EFLFAARALQ GACAALLAPA ALSLITVTFT EGKERARAFG VYGGISGGGA AIGLIVGGLL
TEYASWRWCL LVNVPIALAT AAAALPIVRE SKAEGTPSYD IPGAVTVTTG LLALVYGFTV
AADDGWGSAT TIGLLAGAVA LLAVFVVIEM RTAAPLLPMR VPLERNRGGS FLASLLIGGG
LFAMFLFLTF YFQSTLGYSA LRSGFAFLPF SAGIILSAGL ASQFLPRVGP TILMIIGTAL
AAGGLVLLSQ IGADSSYAGH VLPAEVLISL GMGLAFVPMS SVSLLGVADH DAGVASALVN
TTQQVGGSLG VALLNTVYAT AVSDYLGSHG TGAAAQRQAA IEGYTTSFVW SAVLVGIALV
AVILLVRAGR DDVPAVDGVP VHAG
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