| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4241 |
|---|
| Symbol | |
|---|
| ID | 5672596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 5049153 |
|---|
| End bp | 5050283 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641243114 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001508531 |
|---|
| Protein GI | 158316023 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.468194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGACG GACGTCCGGC GCAGGAGGCT CGGCGGGCCG GAGGCCGGGC GGAACGGGCC
ATCCGGATCA CCACCGTGAT CGCGGTGGCC ACGGTCGCGG CCGTGGCGGG TTTCGTCTCC
TACCGCCACA TGCGCGGCGT CGCCCTGCAA TACGGCGAGG ACGCGATGAC CTCGGCCGTT
CTCCCGTTCA GCGTGGACGG GCTGATCGTG GCCGCGTCGA TGACGATGCT GGCCGACCGG
CGGGCCGGCC GGCGGCGTTC CTGGCTGTCC TACACACTGC TGATGCTGGG GGCGTGCGCG
TCACTGGCGG CGAACGTCCT GCACGCCGAG CCGACCACCG CAGCCCGGAT CATCGCCGGC
TGGCCTCCGC TGGCGCTGCT CGGCTCGTAC GAGCTGCTCA TGCGCCAGAT CCACCCGACC
AGCCGGCGGA CAGCCCGCCA GCAGGCCGCC GCCGCCGCGG CGCCGGCCGA CGTCCCGGCT
GTCGCTCCCC AGGCTGATGG CCCAGCTGCC GGTGGGCAGC CAGGCGGTGG GCAGCCGGTT
CCGGCGCCGG GGTCCATTCC GCCGCAGCGG CAGCGGATGC CCGCCGTCGG CGGCGACTTC
CCGGCTGGCA CCCCCGCTCC CACCGCGACA GCTCCCGCCG CAGCCGACAA CGCTGTGGCC
GACAACGCGG TGGCGGTGGT CGACCTCTCG GTGACCGCAC CCATGGTCAC GCCCGCCCCC
GCGACGGCCC AGGCCCTCGA CCCGGCACCC GGGCGGACGC CTGCGCCGGG CCCGGCCGTC
CCGACAGGTG CCTCGACAAC CGTCCCGACA GGCGGGCCGG CGTCCACGGC CGGGGCCGGC
TCCGCCGGCG GAGTGGACAC CGCGGACTCC TCGGTGAAGC GTGAGGCGAT CATTCGCGCG
CTGGACGAGA CCGGCGGTTC GGCGACCGCG GCGGTCACCC TGCTCGGCCG GTGGGGCATC
ACGGTGAGCA AGAGCTGGGT GTACCAGGTG CGCAAGGAGA CCCGGCACGC CGACGTGCAG
ACCGGGCCGC TGGTCATGCC CACGCACCGT GCCCACCCCG CCAGCCGTGG GCGGCGGCGC
GGCATGGCGC CCGACCGGCC GCTCGTGGCA CCGACGACGA CCAGGGGCTG A
|
|---|
| Protein sequence | MVDGRPAQEA RRAGGRAERA IRITTVIAVA TVAAVAGFVS YRHMRGVALQ YGEDAMTSAV
LPFSVDGLIV AASMTMLADR RAGRRRSWLS YTLLMLGACA SLAANVLHAE PTTAARIIAG
WPPLALLGSY ELLMRQIHPT SRRTARQQAA AAAAPADVPA VAPQADGPAA GGQPGGGQPV
PAPGSIPPQR QRMPAVGGDF PAGTPAPTAT APAAADNAVA DNAVAVVDLS VTAPMVTPAP
ATAQALDPAP GRTPAPGPAV PTGASTTVPT GGPASTAGAG SAGGVDTADS SVKREAIIRA
LDETGGSATA AVTLLGRWGI TVSKSWVYQV RKETRHADVQ TGPLVMPTHR AHPASRGRRR
GMAPDRPLVA PTTTRG
|
|---|
| |