| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4225 |
|---|
| Symbol | |
|---|
| ID | 5672580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5031202 |
|---|
| End bp | 5033145 |
|---|
| Gene Length | 1944 bp |
|---|
| Protein Length | 647 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641243098 |
|---|
| Product | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein |
|---|
| Protein accession | YP_001508515 |
|---|
| Protein GI | 158316007 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0529] Adenylylsulfate kinase and related kinases
[COG2895] GTPases - Sulfate adenylate transferase subunit 1 |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00455] adenylylsulfate kinase (apsK)
[TIGR02034] sulfate adenylyltransferase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.279145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCACG CGGCCAGCGA CCTCGTCGCG GACGACATCG AGGCATACCT GTCGGCGCAC
GAGCACAAGT CGATGCTGCG GTTCATCACC TGCGGCAGTG TGGACGACGG GAAGTCCACG
CTGATCGGGC GGCTGCTCTA CGACTCGAAG CTGGTGTTCT CGGACCACCT CGCCGCGCTG
GAGACCGATT CGAAGAAGGT CGGTACGCAG GGCGACGGCC TGGATTTCGC GCTGCTGGTG
GACGGGTTGG CCGCCGAGAG GGAACAGGGC ATCACGATCG ACGTGGCGTA CCGGTTCTTC
TCCACCGAGC GGCGGAAGTT CATCGTCGCG GACACCCCGG GGCACGAGCA GTACACCCGG
AACATGGTCA CCGGGGCGTC CACCGCGGAT CTGGCGGTGA TTCTCGTCGA CGCCCGCAAG
GGTGTGCTCA CCCAGACCCG GCGGCACAGC CATCTCGTCT CCTTACTCGG GATCCGCAAC
ATAGTCCTGG CGATCAACAA GCTGGACCTC GTCGGCTACT CCCGGGACGT GTTCGCCGGC
ATCGAGGCGG ACTACCGGGC GTTCGCGGCC GAGATCGGAC TGAGCGACAT CGTCGCGATC
CCGTTGTCGG CGCTGGCCGG GGACAACATC ACCGCACTGT CGCCGAACAC TCCCTGGTAC
AGCGGCCCCA CTCTCGTCGG TCACCTGGAG TCCGTCGAGA TCGCCGACGA CCTGCACACC
GGCCCGTTTC GCCTGCCCGT GCAGTGGGTC AACCGCCCCG ACCTGGACTT CCGTGGCTTC
TCCGGGCAGA TCGCCGGCGG TGCCGTGCGC CCTGGAGACC GCGTTCGAGT GCTGCCGTCC
GGTCAGGAAA GCACCGTCGC GCGGATCGTC ACCGCCGACG GCGACCTCGA CGAGGCGGCC
GCGGGCCAGT CGGTCACTCT CACTCTCACG GACGAGATCG ACGTCAGCCG CGGCGACGTC
CTCGCCACCG CGATCGACCC GCCCGCCGTC GCGGACCAGT TCGAATGCCA CCTCGTCTGG
ATGGCCGAGG AACCCATGCT CCCCGGCCGT CCCTACCTGC TCAAGATCGG GAGCCGCACT
GTCGGGGCGA CGGTCACGCA GCCGAAGTAC AAGGTCAACG TCAACACCCT CGAGCACACC
GCCGCCCGCA CCCTCGATCT CAACGAGATC GGCGTGTGCA ACATCAACCT CGACCGGCAG
ATCCCGTTCG ACCCCTACAC CGCCAACCGT GACCTGGGCG GGTTCATCCT CATCGACCGC
TTCACCCAGG CCACCGTGGC TGCCGGTCTG CTGCACTTCG CGCTGCGGCG CGCCGACAAC
GTGCACTGGC AGGCGGTCGA GGTGGACAAG GACGCCCGCG CCCGGCTGAA AGGGCAGCGC
CCGGCGGTCG TCTGGTTCAG CGGCCTGTCC GGTGCCGGGA AGTCGACCAT CGCGAACCTG
GTCGAGAAGC GGCTCCACGA GCAGGGCTAC CACACCTATC TGTTGGACGG TGACAACGTC
CGGCACGGCC TCAACAAGGA TCTCGGATTC ACCGACGCAG ACCGGGTCGA GAACATCCGC
CGCGTGGCGG AGGTGGCCCG GCTCATGGTC GACGCGGGCG TCATCGTGCT GGCCTCGTTC
ATCTCCCCGT TCCGCGCCGA ACGTGCGCTG GCCCGTGACC TGCTCGGCGA GGGAGAGTTC
GTCGAGGTCC ACGTGGACGC GCCCCTGGCG GTGGCCGAGT CCCGGGACCG CAAGGGGCTC
TACGCCAAGG CCCGGCGAGG AGAACTGGTC CACTTCACCG GCATCGACTC CCCGTACGAG
CCCCCCGAGA ACCCCGAACT GCGCCTTGAC GCCAGCGGCG CCCACCCGGC CGCGGCCGCC
GCCGACCTGG TCGTCGACCA CCTGCGTCAG GCCGGTGTGC TCGCCCCGCC CGCGCCTCGC
CCGACCCCGC CCGCCGGAGC ATGA
|
|---|
| Protein sequence | MAHAASDLVA DDIEAYLSAH EHKSMLRFIT CGSVDDGKST LIGRLLYDSK LVFSDHLAAL
ETDSKKVGTQ GDGLDFALLV DGLAAEREQG ITIDVAYRFF STERRKFIVA DTPGHEQYTR
NMVTGASTAD LAVILVDARK GVLTQTRRHS HLVSLLGIRN IVLAINKLDL VGYSRDVFAG
IEADYRAFAA EIGLSDIVAI PLSALAGDNI TALSPNTPWY SGPTLVGHLE SVEIADDLHT
GPFRLPVQWV NRPDLDFRGF SGQIAGGAVR PGDRVRVLPS GQESTVARIV TADGDLDEAA
AGQSVTLTLT DEIDVSRGDV LATAIDPPAV ADQFECHLVW MAEEPMLPGR PYLLKIGSRT
VGATVTQPKY KVNVNTLEHT AARTLDLNEI GVCNINLDRQ IPFDPYTANR DLGGFILIDR
FTQATVAAGL LHFALRRADN VHWQAVEVDK DARARLKGQR PAVVWFSGLS GAGKSTIANL
VEKRLHEQGY HTYLLDGDNV RHGLNKDLGF TDADRVENIR RVAEVARLMV DAGVIVLASF
ISPFRAERAL ARDLLGEGEF VEVHVDAPLA VAESRDRKGL YAKARRGELV HFTGIDSPYE
PPENPELRLD ASGAHPAAAA ADLVVDHLRQ AGVLAPPAPR PTPPAGA
|
|---|
| |