| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4199 |
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| Symbol | |
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| ID | 5672554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4999899 |
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| End bp | 5001554 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243072 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001508489 |
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| Protein GI | 158315981 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.57955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.854948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGACG GACGGGAAGC GACACCGGGC GGGGCCCGCG GCCGCGCCGA GCCGGACGGG
CTGCCCGCGC GTCCGGTGTC CCGCGGCGCG TTCCGCGCGA TGGCCGCCAT CGGGCTGGCC
TTCGTCGTGC TGGCCGCGGC AGTCGCGATG GCGCTGCCCG AGCACATCGG CAAACAGGCG
GCGCAGGCCG CGGTGACGGC TGCCGCGCTC ACCTCCGCGA TCTGCTGCCT CGTCACCGCG
CGACGGGTGC CCCGGCACGA GCGCCGGTGG CGGCGGTTCG AGGCGGCGGC GATCACGTCA
AGCTTCGTGG CGGGAGTGGC CGTCTCAATG GTGGCCAGCG GGGAGACCGT CCCCGATCTC
GCCGCGACCG GGGCCGCGCC GCTGCTCGGC TATGCCCTGG GCCTGGCCGG GCTGCTGACC
TTCCCCACCG AGCGGGCCCG CGCCATCCCG ATCAGCACGA ACAAACGTGG CGGGATGGCC
TGGTACCTCG AGGCCGTCCT CGATGGGCTG CTCGTCGTCG GATCACTGCT GCTGCTCGTC
TACGCGATCC TGGTCGTCCC GCTCGTGCGG TCGACGCAGA TCAACCAGGC GTCGCTGGCG
TTCGGGGTGG CCGGCGGGGC GGGCAAGCTC ATCCTGCTCT CCGCCGTCAT CTTCATCCTG
ATCTTCCGAC GGCCGACGGG CTCGGGATCG CTCAGCCTGC TCAGCGCGAG CCTGCTCCTG
TTCGCCGTGA CCGACGGCGC CGCGCTGAAC GCCTACGCGA AGGCCACCGA CGGCCCGGAC
GCGGTCGTGC TGGTCGGCTT CGCCGGCGGC AGCGTGCTGA CCGCGCTGGC CGCCGCCGCC
TCCCACGACG GCATGATCAT CCGGACGAGG CGCAGCCCGC GCGGGGTCTG GGCCCGCGTC
GCCGTGCCCT ACCTGCCCCT CGGCTGCGTC GGCGCCCTGC TCGCGGCCCA GATCATCACG
CACGCCGACA TCCCGGTCGC GCAGATCATC GGCATGCTCG CGCTGATGCT GCTCGCGCTC
GCCCGCCAGC TCGTGACCAC GATCGACAAC ACGCTGCTGC TGGCCCGCTA CGAGGACAGC
CGGGCCCGGC TGCACCACCA GGCCTTCCAC GACCCGCTGA CCGGCCTGGC GAACCGCACG
CTTTTCTTTC GCCGGCTGCG CGCGGCCATC GACCGGCACG AGCGCACCGG CCACCCGGTG
GCGTTGCTGT TCTGCGACCT GGACGACTTC AAGGTCGTCA ACGACAACCT CGGCCACGCC
GCCGGCGACC GGGTCCTGCG CACGGCGGCC CACCGGCTGG CCCAGGCGGC GGGCCCGACC
GACACGGTGG CCCGCCTCGG CGGCGACGAG TTCGCCGTCC TGTTCGACAC CGGGGCCGCG
GACCGGGCGG GCGGGCGCAC CGAGGAGCTG CGCACGGCCG GCGACCGGAT CCGCGCGGCG
CTGCGGATCG CCGTGGCCAT CGAGGACCGC CGGCACCTGG TGCGCGCCAG CCTCGGCCTG
GTGATCGTGG GCACGGAGGC GGGACCGGTC TGCCCCGACG AAGTGCTCCA GCACGCCGAC
CATGCCATGT ACGCGGCGAA ACGGCTGGGG AAGGGCAACC TCGTCGTCTA CTCCCCGGAG
ATCGACGACT CCCGGCAGGC CGGGATGGCC GGCTGA
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| Protein sequence | MPDGREATPG GARGRAEPDG LPARPVSRGA FRAMAAIGLA FVVLAAAVAM ALPEHIGKQA
AQAAVTAAAL TSAICCLVTA RRVPRHERRW RRFEAAAITS SFVAGVAVSM VASGETVPDL
AATGAAPLLG YALGLAGLLT FPTERARAIP ISTNKRGGMA WYLEAVLDGL LVVGSLLLLV
YAILVVPLVR STQINQASLA FGVAGGAGKL ILLSAVIFIL IFRRPTGSGS LSLLSASLLL
FAVTDGAALN AYAKATDGPD AVVLVGFAGG SVLTALAAAA SHDGMIIRTR RSPRGVWARV
AVPYLPLGCV GALLAAQIIT HADIPVAQII GMLALMLLAL ARQLVTTIDN TLLLARYEDS
RARLHHQAFH DPLTGLANRT LFFRRLRAAI DRHERTGHPV ALLFCDLDDF KVVNDNLGHA
AGDRVLRTAA HRLAQAAGPT DTVARLGGDE FAVLFDTGAA DRAGGRTEEL RTAGDRIRAA
LRIAVAIEDR RHLVRASLGL VIVGTEAGPV CPDEVLQHAD HAMYAAKRLG KGNLVVYSPE
IDDSRQAGMA G
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