Gene Franean1_4187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4187 
Symbol 
ID5672542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4980234 
End bp4981154 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content77% 
IMG OID641243060 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_001508477 
Protein GI158315969 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2977] Phosphopantetheinyl transferase component of siderophore synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00302237 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.969674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTGC CGGGTCCGCC CCGGCTCGCC GGCGGCGCGG TCCTGCTGGC CGCGGTGCTG 
CCGGCGCCCG GCACAGCCTG GTTCCCCGCC GCGGGCCCCG GGAGCGGGCC GGCGCTCGCC
GCGGTGGAGA AGTTCGACGA CGACTTCGGC GGCGCCACGG ACGCCCAGCT GTTCCCCGAG
GAGGCCGCGA CCCTCACCCG CGCGGTCGAC AAGCGCCGCC GCGAGTTCAC CACCGGACGG
ATCTGCGCCC ACCGGGCGCT GGAGGCCCTC GGCGTGCCCG CGGTGCCCAT CCTCCCCGGG
GAGCGCCGTG AGCCGCTGTG GCCGGCCGGG GTGGTCGGCA GCATCACCCA CACCGCCGGT
TACCGGGCGG CCGCCGTCGC CCGCGGCGCG GCAGGTTCGG CGGTGAGCGT CGGCATCGAC
GCCGAGCCGA ACGAGCCGAC GCCCGGCGGC GTGCTCCGCG AGATCTCGCT GCCCGCGGAG
CGGGACATGC TCACCGCGCT GGGCCGGGAG CACCCGGCTG TCTGCTGGGA CCGACTGCTG
TTCAGCGCCA AGGAGTCGGT GTACAAGGCC TGGTTCCCAC TGGCCCAACG CTGGCTGGGC
TTCGACGACG CCGAGCTGAC GATCACCGTC GACGCCGGGG CCGACGGCGG GGGCGGGGCC
GGCAGCGGTC CCGGTGGGAG CAGCCTCAGT GGGATCAGTC CCGGCTGGAG CCGGCCCGGT
GCGAGTGGTG GGGACGGGCC GTCTGTCGAG GGAGCGCCCA TCGCGGGGGC ACCTGGGGTG
GATGTGCGGG GGGTGTTCCA GGCGCGTCTG CTGGTGGCGG GGCCTGCGCT GCCCGGCGGG
GAGCTGACCG GTTTCAGCGG GCGCTGGGCG GTGGGCCGGG GCCTGATCGT CACCGCGATC
GCCTTCACTC CCCCGATCTG A
 
Protein sequence
MTVPGPPRLA GGAVLLAAVL PAPGTAWFPA AGPGSGPALA AVEKFDDDFG GATDAQLFPE 
EAATLTRAVD KRRREFTTGR ICAHRALEAL GVPAVPILPG ERREPLWPAG VVGSITHTAG
YRAAAVARGA AGSAVSVGID AEPNEPTPGG VLREISLPAE RDMLTALGRE HPAVCWDRLL
FSAKESVYKA WFPLAQRWLG FDDAELTITV DAGADGGGGA GSGPGGSSLS GISPGWSRPG
ASGGDGPSVE GAPIAGAPGV DVRGVFQARL LVAGPALPGG ELTGFSGRWA VGRGLIVTAI
AFTPPI