| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4185 |
|---|
| Symbol | |
|---|
| ID | 5672540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4977302 |
|---|
| End bp | 4978588 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641243058 |
|---|
| Product | adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| Protein accession | YP_001508475 |
|---|
| Protein GI | 158315967 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | [TIGR00508] adenosylmethionine-8-amino-7-oxononanoate transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00243821 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.717223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCCT CCGACCTGGT CACCCGGGAC CGCGCGGTCG TCTGGCATCC GTACGCCTCC
GTGCGCGACC AGGCGCCGCT GTTCGCCGTC GCCTCCGCCG CCGGGGTGCG CCTGACCCTC
ACCGACGGCC GCGAGCTGCT CGACGGGATG TCGTCGTGGT GGGCGGCGAT CCACGGATAC
CGCCATCCCG TCCTGGACCA GGCCGCCCGC GACCAGCTGG ACCGGATGTC GCACGTCATG
TTCGGCGGGC TCACCCACGA GCCCGCCGTC GCGCTGGCCG AGCTGCTTGT ACGGGTCACC
CCACCCGGCC TGGAGCGGGT GTTCTTCTGC GACTCCGGCT CCGTCGCCGT CGAGGTCGCG
ATCAAGATGG CGCTGCAGTA CCAGGCCGGA CGCGGCCGGC CCGGGCGGAC GAGGCTGCTC
ACGATCCGCC GCGGCTACCA CGGTGACACC TCCGGCGCGA TGTCGGTCTG CGATCCCGAC
ACCGGCATGC ACCACCTGTT CACCGGCCTG CTGGCCCGGC ATCTGTTCGC CCCCGCCCCG
GCTCCCGGCT TCGACGAGCC GGTCACCGAT GACGACCTCG CCGACGTCGA ACGCCTGCTC
GCCGCCCACG AGGGGGAGAT CGCCGCGGTC GTTCTCGAAC CGGTCGTGCA GGGCGCCGGC
GCGATGCGCT TCTACGCCCC CGGCTGGCTG GCCCGGGTCC GCGAGCTGTG CGACCGGCAC
CGGGTGCTGC TCGTTGCCGA CGAGATCGCG ACCGGCTTCG GGCGCACCGG GGAGCTGTTC
GGCTGCGATC ACGCCGGGAT CACCCCGGAC ATCATGTGTG TCGGCAAGGC GATGACCGGC
GGTTACCTGA CGATGGGCGC CACCCTGTGC ACCACCGAGG TGGCCGACGG CGTCTGCGCG
TCGGAGGCGG GCGCGTTCAT GCACGGCCCC ACGTTCATGG CCAACCCGCT GGCCGCGGCG
GTCTCGCGGG CGAGTGTCGA GCTGCTGCTC GCCTCCCCGT GGAGGGAGCG GGTCCGCGTC
GTGCACGACG CGCTGGCGGC CGGGCTCGCG CCCGCCGCCG ACCTGCCGGG CGTCGCGGAC
GTCCGCACTC TCGGCGCCAT CGGCGTGATC GAGACCCACC GTCCGGTCGA CATGGCCGTC
ATCCAGCCGC TGCTCGTCGA GCTGGGGGTG TGGGTGCGCC CGTTCGGACG GCTCGTCTAC
GCGATGCCGC CGTTCGTGAT GGAGCCGGCG GACGTCGCCA CCCTGACCGC CGCCATGGTC
GCCGCCGTCG CCGCCACCAC CGGCTGA
|
|---|
| Protein sequence | MDASDLVTRD RAVVWHPYAS VRDQAPLFAV ASAAGVRLTL TDGRELLDGM SSWWAAIHGY
RHPVLDQAAR DQLDRMSHVM FGGLTHEPAV ALAELLVRVT PPGLERVFFC DSGSVAVEVA
IKMALQYQAG RGRPGRTRLL TIRRGYHGDT SGAMSVCDPD TGMHHLFTGL LARHLFAPAP
APGFDEPVTD DDLADVERLL AAHEGEIAAV VLEPVVQGAG AMRFYAPGWL ARVRELCDRH
RVLLVADEIA TGFGRTGELF GCDHAGITPD IMCVGKAMTG GYLTMGATLC TTEVADGVCA
SEAGAFMHGP TFMANPLAAA VSRASVELLL ASPWRERVRV VHDALAAGLA PAADLPGVAD
VRTLGAIGVI ETHRPVDMAV IQPLLVELGV WVRPFGRLVY AMPPFVMEPA DVATLTAAMV
AAVAATTG
|
|---|
| |