Gene Franean1_4183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4183 
Symbol 
ID5672538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4973797 
End bp4974624 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content75% 
IMG OID641243056 
Productmethylenetetrahydrofolate dehydrogenase (NADP(+)) 
Protein accessionYP_001508473 
Protein GI158315965 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0949993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.629252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTGC TGGATGGGCG GTCGATGGCC GCCGACATAG GACGCTCGGT CGTCGACGAC 
GTCGAACGGC TCGCCACCAC CGGGGTCACT CCGACCCTGG CGGTCGTGCT GCCGACGGCG
GACGAGGCGG CCCGGTCGTA CGTGCGGGTG ATCGAGCGCG GCGCCGCCAA GGTCGGGGTG
GGCTGCGCCG TCCACGAGCT GACCGGGGAT CCGGACGAGC TGACCGCCAC CGTGGACCGG
CTCGCCGCCG ACCCGGCGGT GCACGGGATG ATCGTGCAGA CGCCGCTGCC GGACGGGCTG
ACCGCCGCCG ACGTGGGTGC CCGCATCCCG GTGGGCAAGG ACGTCGACGG CATGAACCCG
CTGAGCCTGG GCCGGCTCGC CCTCGGCCTG CCCGCGTTCG CGCCGGCGAC CGCGGCGGCC
GTGCTGGAGA TCCTCAACCG GGCCGCGGTG CCGCTGGCCG GCGCCCGGGC GTGTGTGATC
GGCCGCAGCT CGGTGGTGGG CAAGCCGGCG GCGCTGCTGC TGCTCGCCGA GGACGCGACG
GTGACGGTGT GCCATTCGCG GACGAAGGAC CTGGCGACGG TGGCGCACGA CGCCGACATC
GTCGTGGCCG CGGTCGGCCG GCCGAAGATG GTCGGTGCCG GGCATGTCCG GCCCGGGGCG
GTCGTCATCG ACGTCGGCAC GAACTGGACG GACGCCGGCC TGGTCGGTGA CGTCGACGCC
GACGCGGTGG CCCCGGTCGC GGGCGCGCTG ACCCCGGTTC CCGGCGGGGT GGGGCCGGTG
ACGACGATGC TGCTGCTGCG CAACACGGTG CGCGCGGCCG GCGGCTGA
 
Protein sequence
MRLLDGRSMA ADIGRSVVDD VERLATTGVT PTLAVVLPTA DEAARSYVRV IERGAAKVGV 
GCAVHELTGD PDELTATVDR LAADPAVHGM IVQTPLPDGL TAADVGARIP VGKDVDGMNP
LSLGRLALGL PAFAPATAAA VLEILNRAAV PLAGARACVI GRSSVVGKPA ALLLLAEDAT
VTVCHSRTKD LATVAHDADI VVAAVGRPKM VGAGHVRPGA VVIDVGTNWT DAGLVGDVDA
DAVAPVAGAL TPVPGGVGPV TTMLLLRNTV RAAGG