Gene Franean1_4182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4182 
Symbol 
ID5672537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4972994 
End bp4973800 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content76% 
IMG OID641243055 
Productformiminotransferase-cyclodeaminase 
Protein accessionYP_001508472 
Protein GI158315964 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3404] Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.311469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.618001 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACGG TCCCGGGTCG GGTGGGGACG GGTGACGCCG CGGCGTGGCC GTGGTCCCCG 
GCCACGGCCG GCCGTCCACG CGGGAGCGTG ACGGCACACA GGGGTTCCGG CGCGGCGAGC
TGGCCGGCAC AGGTCCGGAC GGGCACGGAT CCGGACAACG GATCGAGGCG GGAGTCGAAA
GCGATGGCGG ACGAGACGCT CGACGGGTTC CTCGAGGCGC TCGCCTCGGC GGCTCCCGCG
CCCGGCGGTG GCGCCGCGGC GGCGGTGCAG GTGGCGCTGG GCGCGGCCCT GGTGAGCATG
GTCACCAACC TGACCATCGG TAAGCCGCGG TACGCCGAGC ACGAGCCGGT GATGCTCGCC
GCCCGCGCCG AGGCGGACCG GCTGCGCGGC GAGGCGCTGG CGCTGGCCGA CGCGGACGCG
GTGGCGTTCA CCGCCGTCAC CGACGCCTAC CGGCTGCCCA AGGAGACCGC CGAGGAGAAG
GCGGCACGCA GCGCCGCGAT CCAGCGGGCG CTGGTCGGGG CGGCCGATGT GCCGCTGCGC
ACCGCGGCGG CGGCCGCCGA GGTGGTCGGG CTGTGCCAGC GCATCCTCGA CGGCGCGAAC
GTCAACGTCC TGTCGGACGT GGCCGTCGCC GCCGCCAGCG CGCGGGCGGC CCTCGACTCG
GCGGCGATCA ACGTGCGGGT GAACCTGGCG TCGATGAGCG ACGCCGCCAC CCGCGACGCG
ACCGCCGCCG AGCTGGACAA GTACCTGTCG TCAGTGACCG GCGCGGACGT TGTCGTGCGC
GCCGTGGGAG ATCGGATCGG GTCATGA
 
Protein sequence
MRTVPGRVGT GDAAAWPWSP ATAGRPRGSV TAHRGSGAAS WPAQVRTGTD PDNGSRRESK 
AMADETLDGF LEALASAAPA PGGGAAAAVQ VALGAALVSM VTNLTIGKPR YAEHEPVMLA
ARAEADRLRG EALALADADA VAFTAVTDAY RLPKETAEEK AARSAAIQRA LVGAADVPLR
TAAAAAEVVG LCQRILDGAN VNVLSDVAVA AASARAALDS AAINVRVNLA SMSDAATRDA
TAAELDKYLS SVTGADVVVR AVGDRIGS