Gene Franean1_4178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4178 
Symbol 
ID5672533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4967315 
End bp4967725 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content67% 
IMG OID641243051 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001508468 
Protein GI158315960 
COG category[R] General function prediction only 
COG ID[COG3324] Predicted enzyme related to lactoylglutathione lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00159015 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.783172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCA CCATCCACAC CAGCTTCCTC CCACACGACG ACCCCGACGC CTCCCTGGCC 
TTCTACCGCG ACACCCTCGG CTTCGAAGTC CGCAACGACG TCGGCTACAA CGGCATGCGC
TGGATCACCG TCGGACCCCC CAACCAGCCC GGCACCTGCA TCGTCCTCGA ACCACCCGCC
GCCTACCCCG GCATCACCGA CGACGAGCAC CGCACCATCA CCGAGATGAT GGCCAAGGGC
AACTACGCCC ACGTCATCCT CGCCACCGCC GACCTCGACG ACACCTTCAC CAAGATCCAG
GCCAGCGGCG CCGAAGTCGT CCAGGAACCC ACCGAACAGC CCTACGGCGT CCGCGACTGC
GCCTTCCGCG ACCCCGCCGG CAACCTCGTC CGGATCAACG AACACCGCTG A
 
Protein sequence
MDITIHTSFL PHDDPDASLA FYRDTLGFEV RNDVGYNGMR WITVGPPNQP GTCIVLEPPA 
AYPGITDDEH RTITEMMAKG NYAHVILATA DLDDTFTKIQ ASGAEVVQEP TEQPYGVRDC
AFRDPAGNLV RINEHR